Pre_GI Gene

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Host: NC_015949 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015949:1180755 Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome

Host Lineage: Caldicellulosiruptor lactoaceticus; Caldicellulosiruptor; Thermoanaerobacterales Family III; Thermoanaerobacterales; Firmicutes; Bacteria

General Information: Environment: Hot spring; Isolation: Alkaline hot spring; Iceland, Hveragerdi; Temp: Thermophile; Temp: 79C; Caldicellulosiruptor lactoaceticus is an extreme thermophile spore-forming bacterium. This organism produces a thermostable cellulase which may have industrial uses.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
118075511818191065peptidase M24QuickGO ontologyBLASTP
118187211823094383-dehydroquinate dehydrataseQuickGO ontologyBLASTP
11823191183179861xylose isomerase domain-containing proteinQuickGO ontologyBLASTP
11831761183694519Shikimate kinaseQuickGO ontologyBLASTP
11838231184671849hypothetical proteinBLASTP
11848471185398552ECF subfamily RNA polymerase sigma-24 subunitQuickGO ontologyBLASTP
11853791185777399hypothetical proteinBLASTP
11857821186078297hypothetical proteinBLASTP
11860951186301207hypothetical proteinBLASTP
11862941187232939ABC transporter-like proteinQuickGO ontologyBLASTP
11872191187977759hypothetical proteinBLASTP
118810811882241175S ribosomal RNAQuickGO ontologyBLASTP
1191404119147976tRNA-AlaQuickGO ontologyBLASTP
119337011955772208pyruvate flavodoxinferredoxin oxidoreductase domain-containing proteinQuickGO ontologyBLASTP
119557411965931020pyruvateketoisovalerate oxidoreductase subunit gammaQuickGO ontologyBLASTP
119662611978101185polynucleotide adenylyltransferase regionQuickGO ontologyBLASTP
11979051198705801histidinol phosphate phosphatase HisJ familyQuickGO ontologyBLASTP
119871311997951083tRNA-specific 2-thiouridylase mnmAQuickGO ontologyBLASTP
11998211200204384FeS cluster assembly scaffold protein NifUQuickGO ontologyBLASTP
120020612013901185cysteine desulfuraseQuickGO ontologyBLASTP
12014551201907453BadMRrf2 family transcriptional regulatorQuickGO ontologyBLASTP
1202587120292834250S ribosomal protein L17QuickGO ontologyBLASTP
12029251203899975DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
1203957120458362730S ribosomal protein S4QuickGO ontologyBLASTP
1204607120499939330S ribosomal protein S11QuickGO ontologyBLASTP
1205019120539337530S ribosomal protein S13QuickGO ontologyBLASTP
1205418120553111450S ribosomal protein L36QuickGO ontology
12055641205782219translation initiation factor IF-1QuickGO ontologyBLASTP
12057971206066270hypothetical proteinBLASTP
12060801206823744methionine aminopeptidase type IQuickGO ontologyBLASTP
12068401207487648adenylate kinaseQuickGO ontologyBLASTP
120752512088321308preprotein translocase subunit SecYQuickGO ontologyBLASTP
1208834120927744450S ribosomal protein L15QuickGO ontologyBLASTP
1209299120980550730S ribosomal protein S5QuickGO ontologyBLASTP
1209826121020037550S ribosomal protein L18QuickGO ontologyBLASTP
1210211121075954950S ribosomal protein L6QuickGO ontologyBLASTP
1210790121118839930S ribosomal protein S8QuickGO ontologyBLASTP
1211216121140118630S ribosomal protein S14QuickGO ontologyBLASTP
1211401121196756750S ribosomal protein L5QuickGO ontologyBLASTP
1211997121232933350S ribosomal protein L24QuickGO ontologyBLASTP
1212352121272036950S ribosomal protein L14QuickGO ontologyBLASTP
1212761121302126130S ribosomal protein S17QuickGO ontologyBLASTP
1213050121326821950S ribosomal protein L29QuickGO ontologyBLASTP
1213255121369844450S ribosomal protein L16QuickGO ontologyBLASTP
1213698121436666930S ribosomal protein S3QuickGO ontologyBLASTP
1214389121475136350S ribosomal protein L22QuickGO ontologyBLASTP
1214811121509528530S ribosomal protein S19QuickGO ontologyBLASTP
1215143121597383150S ribosomal protein L2QuickGO ontologyBLASTP
1216012121630229150S ribosomal protein L25L23QuickGO ontologyBLASTP
1216304121693062750S ribosomal protein L4L1eQuickGO ontologyBLASTP