Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:1684467 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16844671685117651Lysine exporter protein LYSEYGGAQuickGO ontologyBLASTP
16852451686084840transcriptional regulator AraC familyQuickGO ontologyBLASTP
16862601687126867NAD synthetaseQuickGO ontologyBLASTP
16872701687776507hypothetical proteinBLASTP
168789016894671578hypothetical proteinBLASTP
168962616917942169diguanylate cyclaseQuickGO ontologyBLASTP
16926641693248585hypothetical protein
169331716949481632hypothetical proteinBLASTP
1695147169522377tRNA-ProQuickGO ontologyBLASTP
169540416971911788sulfataseQuickGO ontologyBLASTP
16972921697570279protein of unknown function DUF1414QuickGO ontologyBLASTP
16975851698616103237 kDa nucleoid-associated proteinQuickGO ontologyBLASTP
16988461699730885hypothetical proteinBLASTP
16997941700657864peptidase M23BQuickGO ontologyBLASTP
17009591701648690hypothetical proteinBLASTP
17017061702344639RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
17023371703086750anti-ECFsigma factor ChrRQuickGO ontologyBLASTP