Pre_GI Gene

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Host: NC_012483 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012483:1567253 Acidobacterium capsulatum ATCC 51196, complete genome

Host Lineage: Acidobacterium capsulatum; Acidobacterium; Acidobacteriaceae; Acidobacteriales; Acidobacteria; Bacteria

General Information: Isolated from acidic mine drainage in Yanahara mine, Okayama, Japan. Acidophilic bacterium. This genus comprises a number of species commonly found in water reservoirs, microbial mats, many different soil types, marine and freshwater sediments, as well as in hot-spring mats and sediments, etc. Furthermore, they sometimes form the dominant group in a habitat. These bacteria are involved in the first step of destruction of biologically complex molecules produced by autotrophic (capable of synthesizing their own nutrients) microorganisms. Acidobacterium capsulatum is an aerobic, mesophilic, chemo-organotroph able to use a variety of carbon sources and to grow up to pH 6.0. The species comprises several strains characterized by orange pigmentation, production of menoquinones as their sole quinones, and branched-chain iso fatty acids as their cell envelope components.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15672531568239987hypothetical protein
156856715702041638benzoylformate decarboxylaseQuickGO ontologyBLASTP
15704071571378972oxidoreductase zinc-binding dehydrogenase familyQuickGO ontologyBLASTP
157150515728961392aldehyde dehydrogenase NAD family proteinQuickGO ontologyBLASTP
157308215760452964two-component system sensor protein putativeQuickGO ontologyBLASTP
15761671576817651two-component system regulatory proteinQuickGO ontologyBLASTP
15770481577902855hypothetical proteinBLASTP
15779181578055138hypothetical protein
157815415813903237two-component system sensor protein putativeQuickGO ontologyBLASTP
15816771582567891IS3 family transposase orfBQuickGO ontologyBLASTP
15825641582830267IS3 family transposase orfAQuickGO ontologyBLASTP
15829941583122129hypothetical protein
15836561584234579RNA polymerase sigma-70 factor ECF subfamilyQuickGO ontologyBLASTP
15842651584768504hypothetical protein
15855141586440927proline dehydrogenaseQuickGO ontologyBLASTP
158745415885631110GAF domainGGDEF domain proteinQuickGO ontologyBLASTP
158874015897681029hypothetical proteinBLASTP
15898671590481615nitroreductase family proteinQuickGO ontologyBLASTP