Pre_GI Gene

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Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:2168523 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
216852321698031281protein PvdNQuickGO ontologyBLASTP
216980021711701371protein PvdMQuickGO ontologyBLASTP
217153121731231593protein PvdPQuickGO ontologyBLASTP
21733102173636327hypothetical proteinBLASTP
21744592174788330integron gene cassette proteinQuickGO ontologyBLASTP
21749182175274357colicin immunity proteinQuickGO ontologyBLASTP
21757092175981273hypothetical protein
21769672177611645hypothetical proteinBLASTP
21777852178111327hypothetical proteinBLASTP
217842621795771152yd repeat proteinQuickGO ontologyBLASTP
21796012180500900RHS repeat-associated core domain-containing proteinQuickGO ontologyBLASTP
218118321825771395outer membrane pyoverdine eflux proteinQuickGO ontologyBLASTP
218258821845581971Pyoverdine efflux carrier and ATP binding proteinQuickGO ontologyBLASTP
218455921857101152pyoverdine-specific efflux macA-like proteinQuickGO ontologyBLASTP
21861792186661483protein FpvIQuickGO ontologyBLASTP
218680821881421335protein PvdAQuickGO ontologyBLASTP
218837821915783201hybrid sensory histidine kinase in two-component regulatory system with EvgAQuickGO ontologyBLASTP