Pre_GI Gene

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Host: NC_014652 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014652:1032711 Caldicellulosiruptor hydrothermalis 108 chromosome, complete

Host Lineage: Caldicellulosiruptor hydrothermalis; Caldicellulosiruptor; Thermoanaerobacterales Family III; Thermoanaerobacterales; Firmicutes; Bacteria

General Information: Country: Russia; Environment: Hot spring; Isolation: Terrestrial neutral geothermal spring; Temp: Hyperthermophile; Temp: 79C. Caldicellulosiruptor hydrothermalis is a thermphilic gram positive bacterium. This organism produces a thermostable cellulase which may have industrial uses.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10327111033415705two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
103339910347631365integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
103477010359481179metal dependent phosphohydrolaseQuickGO ontologyBLASTP
10361681036674507ferritin dps family proteinQuickGO ontologyBLASTP
10367341036895162hypothetical proteinBLASTP
10372341037554321ribosomal protein s10QuickGO ontologyBLASTP
1037561103819363350S ribosomal protein l3QuickGO ontologyBLASTP
10382231038849627ribosomal protein l4l1eQuickGO ontologyBLASTP
10388511039141291ribosomal protein l25l23QuickGO ontologyBLASTP
10391801040010831ribosomal protein l2QuickGO ontologyBLASTP
10400591040343285ribosomal protein s19QuickGO ontologyBLASTP
10404031040765363ribosomal protein l22QuickGO ontologyBLASTP
10407881041456669ribosomal protein s3QuickGO ontologyBLASTP
10414561041899444ribosomal protein l16QuickGO ontologyBLASTP
10418861042104219ribosomal protein l29QuickGO ontologyBLASTP
1042133104239326130S ribosomal protein s17QuickGO ontologyBLASTP
10424341042802369ribosomal protein l14QuickGO ontologyBLASTP
10428251043157333ribosomal protein l24QuickGO ontologyBLASTP
10431871043729543ribosomal protein l5QuickGO ontologyBLASTP
10437561043941186ribosomal protein s14QuickGO ontologyBLASTP
10439691044367399ribosomal protein s8QuickGO ontologyBLASTP
10443981044946549ribosomal protein l6QuickGO ontologyBLASTP
10449631045331369ribosomal protein l18QuickGO ontologyBLASTP
10453521045858507ribosomal protein s5QuickGO ontologyBLASTP
10458801046323444ribosomal protein l15QuickGO ontologyBLASTP
104632510476321308preprotein translocase secy subunitQuickGO ontologyBLASTP
10476711048318648adenylate kinaseQuickGO ontologyBLASTP
10483351049078744methionine aminopeptidase type iQuickGO ontologyBLASTP
10490921049361270hypothetical proteinBLASTP
10493761049594219translation initiation factor if-1QuickGO ontologyBLASTP
10496261049739114ribosomal protein l36QuickGO ontology
1049763105013737530S ribosomal protein s13QuickGO ontologyBLASTP
1050157105054939330S ribosomal protein s11QuickGO ontologyBLASTP
10505731051199627ribosomal protein s4QuickGO ontologyBLASTP
10512581052232975DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
10522291052570342ribosomal protein l17QuickGO ontologyBLASTP
1052707105278074tRNA-GlnQuickGO ontology
1052789105286476tRNA-GluQuickGO ontologyBLASTP
10532881053535248
10535321053750219hypothetical protein
10539541054406453transcriptional regulator badmrrf2 familyQuickGO ontologyBLASTP
105447110556641194cysteine desulfurase nifsQuickGO ontologyBLASTP
10556571056040384fes cluster assembly scaffold protein nifuQuickGO ontologyBLASTP
105606610571481083tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferaseQuickGO ontologyBLASTP
10571561057956801histidinol phosphate phosphatase hisj familyQuickGO ontologyBLASTP
105805010592341185polynucleotide adenylyltransferase regionQuickGO ontologyBLASTP
105926710602861020pyruvateketoisovalerate oxidoreductase gamma subunitQuickGO ontologyBLASTP
106028310624902208pyruvate flavodoxinferredoxin oxidoreductase domain proteinQuickGO ontologyBLASTP
10624901062606117hypothetical protein
10627771064308153216S ribosomal RNAQuickGO ontologyBLASTP
1064383106445876tRNA-AlaQuickGO ontologyBLASTP
1064468106454477tRNA-IleQuickGO ontology
10646141067564295123S ribosomal RNAQuickGO ontologyBLASTP
106762310677391175S ribosomal RNAQuickGO ontologyBLASTP
10678431068601759hypothetical proteinBLASTP
10685881069526939abc transporter related proteinQuickGO ontologyBLASTP
10695191069725207hypothetical proteinBLASTP
10697421070038297hypothetical proteinBLASTP
10700431070444402hypothetical proteinBLASTP
10704251070976552RNA polymerase sigma-24 subunit ecf subfamilyQuickGO ontologyBLASTP
10711521072000849hypothetical proteinBLASTP
10721291072647519shikimate kinaseQuickGO ontologyBLASTP
10726441073504861xylose isomerase domain protein tim barrelQuickGO ontologyBLASTP
107351410739514383-dehydroquinate dehydratase type iiQuickGO ontologyBLASTP