Pre_GI Gene

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Host: NC_014931 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014931:1642179 Variovorax paradoxus EPS chromosome, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Environment: Soil; Temp: Mesophile. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
164217916482056027alpha-2-macroglobulin domain proteinQuickGO ontologyBLASTP
164838816495301143Uncharacterized conserved protein UCP028704 OpgCQuickGO ontologyBLASTP
16495381650302765lipolytic protein G-D-S-L familyQuickGO ontologyBLASTP
16503341651101768Anti-sigma K factor RskAQuickGO ontologyBLASTP
16511091651702594RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
16518511652390540hypothetical protein
165240416537141311hypothetical proteinBLASTP
16544991655431933Integrase catalytic regionQuickGO ontologyBLASTP
16553891655781393transposase IS3IS911 family proteinQuickGO ontologyBLASTP
165792516594721548hypothetical proteinBLASTP
16607561660965210hypothetical protein
166174616631851440RND efflux system outer membrane lipoprotein NodT familyQuickGO ontologyBLASTP
166318516663643180transporter hydrophobeamphiphile efflux-1 HAE1 familyQuickGO ontologyBLASTP
166637416676001227efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
166778416692621479Rhomboid family proteinQuickGO ontology
166930316707001398argininosuccinate lyaseQuickGO ontologyBLASTP