Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:521436 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
520676521443768Fe3-transporting ATPaseQuickGO ontologyBLASTP
5214365234301995protein of unknown function DUF214QuickGO ontologyBLASTP
523652524410759ATP-dependent transcriptional regulator MalT-like LuxR familyQuickGO ontologyBLASTP
524714525433720urea carboxylase-associated protein 2QuickGO ontologyBLASTP
525500526153654urea carboxylase-associated protein 1QuickGO ontologyBLASTP
5261765297693594urea carboxylaseQuickGO ontologyBLASTP
5297715314861716allophanate hydrolaseQuickGO ontologyBLASTP
531822532148327nitrogen regulatory protein P-IIQuickGO ontologyBLASTP
532161532505345nitrogen regulatory protein P-IIQuickGO ontologyBLASTP
5325635336241062aliphatic sulfonates family ABC transporter periplasmic ligand-binding proteinQuickGO ontologyBLASTP
533624534400777ABC-type transporter integral membrane subunitQuickGO ontologyBLASTP
534413535246834Taurine-transporting ATPaseQuickGO ontologyBLASTP
5362115374221212hypothetical protein
541247541735489pyridoxamine 5-phosphate oxidase-related FMN-binding proteinQuickGO ontologyBLASTP
542517542915399Nucleoside-diphosphate kinaseQuickGO ontologyBLASTP
543158543628471RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
5436325449691338hypothetical proteinBLASTP
5453635473992037glycogen debranching enzymeQuickGO ontologyBLASTP
547523547957435hypothetical protein
547981548271291hypothetical proteinBLASTP
548286549245960DNA binding domain protein excisionase familyQuickGO ontologyBLASTP
549281549493213molybdenum-pterin binding proteinQuickGO ontologyBLASTP
549845550723879molybdenum ABC transporter periplasmic molybdate-binding proteinQuickGO ontologyBLASTP
550752551453702molybdate ABC transporter inner membrane subunitQuickGO ontologyBLASTP
5514505524871038Fe3-transporting ATPaseQuickGO ontologyBLASTP
552805553623819nitrogenase iron proteinQuickGO ontologyBLASTP