Pre_GI Gene

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Host: NC_015177 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015177:2642368 Pedobacter saltans DSM 12145 chromosome, complete genome

Host Lineage: Pedobacter saltans; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Country: Iceland; Environment: Marine; Isolation: Soil, Iceland; Temp: Mesophile. Strains of the genus Pedobacter are heparinase-producing, obligately aerobic, Gram-negative rods.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
264236826435551188translation elongation factor 1A EF-1AEF-TuQuickGO ontologyBLASTP
2643618264368972tRNA-ThrQuickGO ontology
2643755264382773tRNA-GlyQuickGO ontology
2643853264393381tRNA-TyrQuickGO ontology
2643978264405073tRNA-ThrQuickGO ontology
26442252644563339ribosomal subunit interface proteinQuickGO ontologyBLASTP
26445772645458882integrase family proteinQuickGO ontologyBLASTP
26455222645710189ribosomal protein S21QuickGO ontologyBLASTP
26458032646336534adenine phosphoribosyltransferaseQuickGO ontologyBLASTP
26463332647211879hypothetical proteinBLASTP
264732426490751752phospholipidglycerol acyltransferaseQuickGO ontologyBLASTP
26491322650115984acyl-acyl-carrier-protein desaturaseQuickGO ontologyBLASTP
265083826509491125S ribosomal RNAQuickGO ontologyBLASTP
26510182653888287123S ribosomal RNAQuickGO ontologyBLASTP
2654021265409777tRNA-AlaQuickGO ontologyBLASTP
2654116265418974tRNA-IleQuickGO ontology
26543102655826151716S ribosomal RNAQuickGO ontologyBLASTP
265633326575141182Acetyl xylan esteraseQuickGO ontologyBLASTP
2657765265783773tRNA-PheQuickGO ontology
26579522658611660hypothetical proteinBLASTP
265865326612892637TonB-dependent receptor plugQuickGO ontologyBLASTP
26613072662281975anti-FecI sigma factor FecRQuickGO ontologyBLASTP
26622892662399111hypothetical protein
26624242662972549RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
266309626643881293protein of unknown function DUF224 cysteine-rich region domain proteinQuickGO ontologyBLASTP
26643302665190861protein of unknown function DUF224 cysteine-rich region domain proteinQuickGO ontologyBLASTP