Pre_GI Gene

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Host: NC_008312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008312:577302 Trichodesmium erythraeum IMS101, complete genome

Host Lineage: Trichodesmium erythraeum; Trichodesmium; ; Oscillatoriales; Cyanobacteria; Bacteria

General Information: Trichodesmium erythraeum strain IMS101 was isolated from the North Carolina coast in 1992 and grows in straight filaments. Filamentous marine cyanobacterium. This filamentous marine cyanobacterium is a nitrogen-fixing organism that contribues a significant amount of the global fixed nitrogen each year. These bacteria are unusual in that nitrogen fixation takes place in a differentiated cell called the diazocyte which is different from the nitrogen-fixing differentiated cell (heterocyst) found in other cyanobacteria. The diazocyte is developed in order to protect the oxygen-sensitive nitrogenases and includes a number of changes including production of more membranes and down-regulation of photosynthetic activity during times of peak nitrogen fixation (noontime). This organism gives the Red Sea its name when large blooms appear and is one of the organisms most often associated with large blooms in marine waters.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
577302578246945hypothetical protein
5785385800401503orotate phosphoribosyltransferaseQuickGO ontologyBLASTP
5816885830431356RNA modification enzyme MiaB familyQuickGO ontologyBLASTP
5836925854791788surface antigen D15QuickGO ontologyBLASTP
5854925887133222filamentous haemagglutinin family outer membrane proteinQuickGO ontologyBLASTP
5887495916312883Tetratricopeptide regionQuickGO ontologyBLASTP
591650592441792protein of unknown function DUF928QuickGO ontologyBLASTP
5925565949072352putative Chase2 sensor proteinQuickGO ontologyBLASTP
595024595416393hypothetical protein
5955395968101272WD-40 repeatQuickGO ontologyBLASTP
5975585986461089RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
599368599778411hypothetical protein
6003056031212817CadherinQuickGO ontologyBLASTP