Pre_GI: BLASTP Hits

Subject	Start	End	Length	Subject Host Description	CDS description	E-value	Bit score
NC_009012:3421000:3425716	3425716	3426474	759	Clostridium thermocellum ATCC 27405, complete genome	RNA polymerase, sigma 28 subunit	5e-76	284
NC_018664:1:9917	9917	10708	792	Clostridium acidurici 9a chromosome, complete genome	RNA polymerase factor sigma-70 RpoD	3e-59	228
NC_009922:1:10249	10249	11061	813	Alkaliphilus oremlandii OhILAs, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG family	1e-57	223
NC_014614:6115:11604	11604	12425	822	Clostridium sticklandii, complete genome	RNA polymerase sigma-37 factor (sigma-B)	5e-56	217
NC_016109:5455060:5471736	5471736	5472818	1083	Kitasatospora setae KM-6054, complete genome	putative RNA polymerase sigma factor	1e-45	182
NC_012673:2023297:2027191	2027191	2027991	801	Exiguobacterium sp. AT1b, complete genome	RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily	4e-45	181
NC_019896:3491000:3517221	3517221	3518015	795	Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete	RNA polymerase sigma factor SigB	2e-43	176
NC_013159:2913927:2928800	2928800	2929600	801	Saccharomonospora viridis DSM 43017, complete genome	RNA polymerase sigma factor, sigma-70 family	2e-43	176
NC_014479:509919:510693	510693	511481	789	Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete	RNA polymerase sigma factor SigB	1e-43	176
NC_008699:1816392:1818821	1818821	1819633	813	Nocardioides sp. JS614, complete genome	sigma-70 region 2 domain protein	1e-43	176
NC_000964:521975:522417	522417	523211	795	Bacillus subtilis subsp. subtilis str. 168, complete genome	sigma factor B	1e-43	176
NC_016047:637778:639621	639621	640409	789	Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete	RNA polymerase sigma-B factor	1e-43	176
NC_014976:2735423:2737266	2737266	2738054	789	Bacillus subtilis BSn5 chromosome, complete genome	RNA polymerase sigma factor SigB	1e-43	176
NC_020410:495184:495958	495958	496746	789	Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete	RNA polymerase sigma-B factor	5e-43	174
NC_009725:496443:497217	497217	498005	789	Bacillus amyloliquefaciens FZB42, complete genome	SigB	5e-43	174
NC_019842:484933:485381	485381	486169	789	Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,	RNA polymerase sigma factor SigB	5e-43	174
NC_013316:1:9857	9857	10630	774	Clostridium difficile R20291, complete genome	RNA polymerase sigma-B factor	8e-43	173
NC_009089:1:9857	9857	10630	774	Clostridium difficile 630, complete genome	RNA polymerase sigma-B factor	8e-43	173
NC_021177:4221309:4226012	4226012	4226878	867	Streptomyces fulvissimus DSM 40593, complete genome	RNA polymerase sigma factor	2e-42	172
NC_017191:467207:467981	467981	468769	789	Bacillus amyloliquefaciens XH7 chromosome, complete genome	RNA polymerase sigma factor SigB	2e-42	172
NC_017190:466236:466684	466684	467472	789	Bacillus amyloliquefaciens LL3 chromosome, complete genome	RNA polymerase sigma-37 factor (sigma(B))	2e-42	172
NC_017188:461177:461951	461951	462739	789	Bacillus amyloliquefaciens TA208 chromosome, complete genome	RNA polymerase sigma factor SigB	2e-42	172
NC_014551:483773:484547	484547	485335	789	Bacillus amyloliquefaciens DSM 7, complete genome	RNA polymerase sigma-37 factor (sigma(B))	2e-42	172
NC_014219:567033:568900	568900	569706	807	Bacillus selenitireducens MLS10 chromosome, complete genome	transcriptional regulator, LuxR family	2e-41	169
NC_006582:883922:886206	886206	886991	786	Bacillus clausii KSM-K16, complete genome	sigma factor B	2e-41	169
NC_013595:9149273:9165311	9165311	9166111	801	Streptosporangium roseum DSM 43021, complete genome	putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily	2e-41	169
NC_008578:591357:595878	595878	596741	864	Acidothermus cellulolyticus 11B, complete genome	RNA polymerase, sigma 28 subunit	2e-41	169
NC_004193:375416:375416	375416	675301	299886	Oceanobacillus iheyensis HTE831, complete genome		4e-40	164
NC_021177:4221309:4227113	4227113	4228033	921	Streptomyces fulvissimus DSM 40593, complete genome	RNA polymerase sigma factor	5e-40	164
NC_003155:883500:890067	890067	890906	840	Streptomyces avermitilis MA-4680, complete genome	RNA polymerase sigma factor	3e-39	162
NC_004193:375416:655820	655820	656611	792	Oceanobacillus iheyensis HTE831, complete genome	sigma factor B	2e-39	162
NC_010556:2773396:2793010	2793010	2793807	798	Exiguobacterium sibiricum 255-15, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG family	5e-38	157
NC_012121:1578190:1593851	1593851	1594621	771	Staphylococcus carnosus subsp. carnosus TM300, complete genome	sigma factor B	5e-38	157
NC_015312:3675148:3723281	3723281	3724171	891	Pseudonocardia dioxanivorans CB1190 chromosome, complete genome	SigB/F/G subfamily RNA polymerase sigma-28 subunit	4e-37	154
NC_018704:347948:352252	352252	353040	789	Amphibacillus xylanus NBRC 15112, complete genome	RNA polymerase sigma-B factor	3e-35	148
NC_015589:3085442:3087998	3087998	3088780	783	Desulfotomaculum ruminis DSM 2154 chromosome, complete genome	RNA polymerase sigma-F factor	2e-32	139
NC_018665:2563375:2582816	2582816	2583421	606	Exiguobacterium antarcticum B7 chromosome, complete genome	RNA polymerase sigma factor	2e-32	139
NC_016593:2370000:2390258	2390258	2391010	753	Geobacillus thermoleovorans CCB_US3_UF5 chromosome, complete	RNA polymerase sigma-F factor	4e-32	138
NC_014377:1227850:1235222	1235222	1235947	726	Thermosediminibacter oceani DSM 16646 chromosome, complete genome	RNA polymerase, sigma subunit, RpoX/SigF	4e-31	135
NC_009454:1246393:1265494	1265494	1266273	780	Pelotomaculum thermopropionicum SI, complete genome	DNA-directed RNA polymerase specialized sigma subunit	1e-30	133
NC_016109:785819:791016	791016	791861	846	Kitasatospora setae KM-6054, complete genome	putative RNA polymerase sigma factor	2e-30	132
NC_017195:2273216:2292128	2292128	2292895	768	Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, complete	RNA polymerase sigma-F factor	1e-29	130
NC_014538:1311500:1332605	1332605	1333345	741	Thermoanaerobacter sp. X513 chromosome, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily	1e-28	126
NC_013169:1410384:1412179	1412179	1412964	786	Kytococcus sedentarius DSM 20547, complete genome	RNA polymerase sigma factor, sigma-70 family	2e-26	119
NC_013525:1953920:1974765	1974765	1976555	1791	Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	2e-25	116
NC_013595:3388000:3388600	3388600	3389376	777	Streptosporangium roseum DSM 43021, complete genome	putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily	2e-24	112
NC_013192:1993718:1993718	1993718	1994896	1179	Leptotrichia buccalis DSM 1135, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	8e-24	110
NC_010296:5002428:5008809	5008809	5010059	1251	Microcystis aeruginosa NIES-843, complete genome	RNA polymerase sigma factor RpoD	2e-23	109
NC_014220:1670000:1685266	1685266	1686351	1086	Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	2e-23	109
NC_011969:3627980:3653131	3653131	3654000	870	Bacillus cereus Q1 chromosome, complete genome	sporulation sigma factor sigg	3e-23	108
NC_014220:837926:842737	842737	843507	771	Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily	8e-23	107
NC_020291:1389114:1393357	1393357	1394130	774	Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome	RNA polymerase sigma-G factor SigG	1e-22	106
NC_006322:2592176:2607296	2607296	2608417	1122	Bacillus licheniformis ATCC 14580, complete genome	RNA polymerase sigma factor	2e-22	106
NC_006177:3192500:3205197	3205197	3205958	762	Symbiobacterium thermophilum IAM 14863, complete genome	RNA polymerase sigma factor related to flagellar biosynthesis	2e-22	106
NC_016048:2734563:2757667	2757667	2758377	711	Oscillibacter valericigenes Sjm18-20, complete genome	putative RNA polymerase sigma factor	5e-22	104
NC_006270:2591317:2606437	2606437	2607558	1122	Bacillus licheniformis ATCC 14580, complete genome	RNA polymerase sigma factor	4e-22	104
NC_008054:1030994:1053267	1053267	1054385	1119	Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete	RNA polymerase sigma factor RpoD (Sigma-A)	1e-21	103
NC_016782:1385800:1411361	1411361	1412941	1581	Corynebacterium diphtheriae 241 chromosome, complete genome	RNA polymerase sigma factor A	1e-21	103
NC_016783:1397975:1431953	1431953	1433533	1581	Corynebacterium diphtheriae INCA 402 chromosome, complete genome	RNA polymerase sigma factor A	1e-21	103
NC_016785:1357500:1389513	1389513	1391093	1581	Corynebacterium diphtheriae CDCE 8392 chromosome, complete genome	RNA polymerase sigma factor A	1e-21	103
NC_016786:1359064:1411626	1411626	1413206	1581	Corynebacterium diphtheriae HC01 chromosome, complete genome	RNA polymerase sigma factor A	1e-21	103
NC_016799:1439000:1463172	1463172	1464752	1581	Corynebacterium diphtheriae 31A chromosome, complete genome	RNA polymerase sigma factor A	1e-21	103
NC_016801:1422500:1453156	1453156	1454736	1581	Corynebacterium diphtheriae C7 (beta) chromosome, complete genome	RNA polymerase sigma factor A	1e-21	103
NC_016802:1317365:1396152	1396152	1397732	1581	Corynebacterium diphtheriae HC02 chromosome, complete genome	RNA polymerase sigma factor A	1e-21	103
NC_016787:1350676:1402928	1402928	1404520	1593	Corynebacterium diphtheriae HC03 chromosome, complete genome	RNA polymerase sigma factor A	1e-21	103
NC_016781:1297782:1320469	1320469	1322022	1554	Corynebacterium pseudotuberculosis 3/99-5 chromosome, complete	RNA polymerase sigma factor rpoD	9e-22	103
NC_017303:1297793:1320477	1320477	1322030	1554	Corynebacterium pseudotuberculosis I19 chromosome, complete genome	RNA polymerase sigma factor rpoD	9e-22	103
NC_016788:1376000:1406465	1406465	1407985	1521	Corynebacterium diphtheriae HC04 chromosome, complete genome	RNA polymerase sigma factor A	8e-22	103
NC_016790:1345638:1379067	1379067	1380587	1521	Corynebacterium diphtheriae VA01 chromosome, complete genome	RNA polymerase sigma factor A	8e-22	103
NC_002935:1378566:1423091	1423091	1424599	1509	Corynebacterium diphtheriae NCTC 13129, complete genome	RNA polymerase sigma factor	8e-22	103
NC_008529:1042220:1071584	1071584	1072702	1119	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	3e-21	102
NC_007644:626992:648290	648290	649375	1086	Moorella thermoacetica ATCC 39073, complete genome	sigma 38 (RpoS)	2e-21	102
NC_005125:2811986:2830221	2830221	2830985	765	Gloeobacter violaceus PCC 7421, complete genome	sigma factor SigF	5e-21	101
NC_012034:802453:802453	802453	803706	1254	Anaerocellum thermophilum DSM 6725, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	6e-21	101
NC_013517:3082279:3083339	3083339	3084502	1164	Sebaldella termitidis ATCC 33386, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	1e-20	100
NC_016789:1432000:1456893	1456893	1458446	1554	Corynebacterium diphtheriae PW8 chromosome, complete genome	RNA polymerase sigma factor A	9e-21	100
NC_016800:1411000:1439503	1439503	1441083	1581	Corynebacterium diphtheriae BH8 chromosome, complete genome	RNA polymerase sigma factor A	7e-21	100
NC_009380:1663545:1684802	1684802	1686430	1629	Salinispora tropica CNB-440 chromosome, complete genome	RNA polymerase sigma factor	1e-20	99.8
NC_010730:1724443:1724925	1724925	1725653	729	Sulfurihydrogenibium sp. YO3AOP1, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG	8e-20	97.4
NC_021182:2219286:2228867	2228867	2229988	1122	Clostridium pasteurianum BC1, complete genome	RNA polymerase sigma factor, sigma-70 family	1e-19	97.1
NC_011296:909558:921190	921190	922629	1440	Thermodesulfovibrio yellowstonii DSM 11347, complete genome	RNA polymerase sigma factor RpoD	2e-19	96.3
NC_013715:767722:781666	781666	783048	1383	Rothia mucilaginosa DY-18, complete genome	DNA-directed RNA polymerase, sigma subunit	6e-19	94.7
NC_015318:249445:254015	254015	255490	1476	Hippea maritima DSM 10411 chromosome, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	5e-19	94.7
NC_013510:1849751:1870803	1870803	1872482	1680	Thermomonospora curvata DSM 43183, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	6e-19	94.4
NC_004578:1719849:1727080	1727080	1728087	1008	Pseudomonas syringae pv. tomato str. DC3000, complete genome	RNA polymerase sigma factor	9e-19	94
NC_015672:2236000:2255576	2255576	2256508	933	Flexistipes sinusarabici DSM 4947 chromosome, complete genome	RpoD subfamily RNA polymerase sigma-70 subunit	1e-18	93.6
NC_016894:2931213:2931213	2931213	2932046	834	Acetobacterium woodii DSM 1030 chromosome, complete genome	RNA polymerase, sigma 28 subunit FliA	1e-18	93.2
NC_011126:1430608:1443052	1443052	1444788	1737	Hydrogenobaculum sp. Y04AAS1, complete genome	RNA polymerase, sigma 70 subunit, RpoD family	2e-18	93.2
NC_015587:1414304:1423388	1423388	1425124	1737	Hydrogenobaculum sp. SHO chromosome, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	2e-18	92.8
NC_015557:1412917:1423520	1423520	1425256	1737	Hydrogenobaculum sp. 3684 chromosome, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	2e-18	92.8
NC_009380:1663545:1667471	1667471	1668469	999	Salinispora tropica CNB-440 chromosome, complete genome	RNA polymerase sigma factor SigB	2e-18	92.8
NC_014314:755166:772224	772224	773732	1509	Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete	RNA polymerase sigma 70 subunit RpoD subfamily	2e-18	92.4
NC_013515:550464:567344	567344	568483	1140	Streptobacillus moniliformis DSM 12112, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	4e-18	91.7
NC_008529:1042220:1070412	1070412	1071548	1137	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	6e-18	91.3
NC_015957:8677395:8696862	8696862	8698106	1245	Streptomyces violaceusniger Tu 4113 chromosome, complete genome	RpoD subfamily RNA polymerase sigma-70 subunit	6e-18	91.3
NC_016629:3396500:3420075	3420075	3421859	1785	Desulfovibrio africanus str. Walvis Bay chromosome, complete	RpoD subfamily RNA polymerase sigma-70 subunit	6e-18	91.3
NC_008054:1030994:1052095	1052095	1053231	1137	Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete	RNA polymerase sigma factor	7e-18	90.9
NC_009850:1011293:1014453	1014453	1016333	1881	Arcobacter butzleri RM4018, complete genome	RNA polymerase sigma 70 factor	7e-18	90.9
NC_014393:1782811:1798057	1798057	1799148	1092	Clostridium cellulovorans 743B chromosome, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	8e-18	90.9
NC_012438:159927:161195	161195	161917	723	Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genome	RNA polymerase sigma-D factor (Sigma-28)	1e-17	90.5
NC_013416:1429881:1448118	1448118	1449968	1851	Aggregatibacter actinomycetemcomitans D11S-1, complete genome	RNA polymerase sigma factor RpoD (Sigma-70)	9e-18	90.5
NC_010424:531727:531727	531727	532809	1083	Candidatus Desulforudis audaxviator MP104C, complete genome	RNA polymerase, sigma 70 subunit, RpoD family	9e-18	90.5
NC_016513:1761830:1782400	1782400	1784250	1851	Aggregatibacter actinomycetemcomitans ANH9381 chromosome, complete	DNA-directed RNA polymerase sigma subunit RpoD	1e-17	90.1
NC_013165:2440883:2456535	2456535	2457479	945	Slackia heliotrinireducens DSM 20476, complete genome	RNA polymerase sigma factor, sigma-70 family	1e-17	90.1
NC_013510:2782240:2799999	2799999	2801333	1335	Thermomonospora curvata DSM 43183, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	1e-17	89.7
NC_007498:1666242:1677244	1677244	1678287	1044	Pelobacter carbinolicus DSM 2380, complete genome	DNA-directed RNA polymerase, sigma 70/sigma 32 subunit	2e-17	89.7
NC_002505:514732:550407	550407	552284	1878	Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete	RNA polymerase sigma factor	2e-17	89.4
NC_016445:2938887:2961443	2961443	2963320	1878	Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete	RNA polymerase primary sigma factor	2e-17	89.4
NC_012668:62500:68005	68005	69933	1929	Vibrio cholerae MJ-1236 chromosome 1, complete sequence	RNA polymerase sigma factor RpoD	2e-17	89.4
NC_017160:676249:695099	695099	696157	1059	Yersinia pestis D182038 chromosome, complete genome	RNA polymerase sigma factor RpoD	2e-17	89.4
NC_014623:7331860:7336519	7336519	7338639	2121	Stigmatella aurantiaca DW4/3-1 chromosome, complete genome	RNA polymerase sigma factor rpod	3e-17	89
NC_014837:3739408:3746389	3746389	3748233	1845	Pantoea sp. At-9b chromosome, complete genome	RNA polymerase,sigma 70 subunit,RpoD	3e-17	89
NC_015713:2453409:2453409	2453409	2455073	1665	Simkania negevensis Z chromosome gsn.131, complete genome	rNA polymerase sigma factor rpoD	3e-17	89
NC_016602:3122700:3127558	3127558	3129444	1887	Vibrio furnissii NCTC 11218 chromosome 1, complete sequence	RNA polymerase sigma factor RpoD	3e-17	89
NC_009831:1255995:1273107	1273107	1274945	1839	Shewanella sediminis HAW-EB3, complete genome	RNA polymerase, sigma 70 subunit, RpoD family	3e-17	89
NC_003366:2286083:2298082	2298082	2299203	1122	Clostridium perfringens str. 13, complete genome	RNA polymerase sigma factor	3e-17	89
NC_008262:2169262:2181235	2181235	2182335	1101	Clostridium perfringens SM101, complete genome	RNA polymerase sigma factor RpoD	3e-17	89
NC_019908:852230:859282	859282	860094	813	Brachyspira pilosicoli P43/6/78 chromosome, complete genome	RNA polymerase sigma factor WhiG	3e-17	88.6
NC_018607:1134900:1143853	1143853	1144665	813	Brachyspira pilosicoli B2904 chromosome, complete genome	RNA polymerase sigma factor	3e-17	88.6
NC_009921:5202607:5225702	5225702	5226904	1203	Frankia sp. EAN1pec, complete genome	RNA polymerase, sigma 70 subunit, RpoD family	4e-17	88.6
NC_019970:1991944:1999871	1999871	2000944	1074	Thermoanaerobacterium thermosaccharolyticum M0795, complete genome	RNA polymerase, sigma 70 subunit, RpoD	4e-17	88.6
NC_015555:863173:872200	872200	873273	1074	Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete	RNA polymerase, sigma 70 subunit, RpoD subfamily	4e-17	88.6
NC_004545:15650:58313	58313	60142	1830	Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome	RNA polymerase sigma factor RpoD	4e-17	88.6
NC_014330:2409559:2420099	2420099	2420911	813	Brachyspira pilosicoli 95/1000 chromosome, complete genome	RNA polymerase sigma factor	3e-17	88.6
NC_018604:1329228:1338176	1338176	1338988	813	Brachyspira pilosicoli WesB complete genome	RNA polymerase sigma factor	3e-17	88.6
NC_008149:587689:608783	608783	610621	1839	Yersinia pestis Nepal516, complete genome	RNA polymerase sigma factor RpoD	3e-17	88.6
NC_009708:633054:649574	649574	651412	1839	Yersinia pseudotuberculosis IP 31758 chromosome, complete genome	RNA polymerase sigma factor RpoD	3e-17	88.6
NC_014029:729675:750762	750762	752600	1839	Yersinia pestis Z176003 chromosome, complete genome	RNA polymerase sigma factor RpoD	3e-17	88.6
NC_017154:671816:692914	692914	694752	1839	Yersinia pestis D106004 chromosome, complete genome	RNA polymerase sigma factor RpoD	3e-17	88.6
NC_016816:674171:686179	686179	688023	1845	Pantoea ananatis LMG 5342, complete genome	RNA polymerase sigma factor RpoD	3e-17	88.6
NC_015224:3892972:3894878	3894878	3896716	1839	Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,	RNA polymerase sigma factor RpoD	3e-17	88.6
NC_008800:4013298:4019198	4019198	4021036	1839	Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,	RNA polymerase sigma factor RpoD	3e-17	88.6
NC_015663:770485:772381	772381	774225	1845	Enterobacter aerogenes KCTC 2190 chromosome, complete genome	RNA polymerase sigma factor RpoD	5e-17	88.2
NC_014618:690056:726532	726532	728376	1845	Enterobacter cloacae SCF1 chromosome, complete genome	RNA polymerase sigma-70 subunit RpoD	5e-17	88.2
NC_014328:1135854:1150732	1150732	1151457	726	Clostridium ljungdahlii ATCC 49587 chromosome, complete genome	RNA polymerase sigma factor for flagellar operon FliA	6e-17	87.8
NC_011761:2067695:2080861	2080861	2082735	1875	Acidithiobacillus ferrooxidans ATCC 23270 chromosome, complete	RNA polymerase sigma factor RpoD	6e-17	87.8
NC_009512:469000:486003	486003	487853	1851	Pseudomonas putida F1, complete genome	RNA polymerase, sigma 70 subunit, RpoD	6e-17	87.8
NC_010939:1633000:1651959	1651959	1653818	1860	Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete	RNA polymerase sigma factor 70	6e-17	87.8
NC_015733:443122:457552	457552	459402	1851	Pseudomonas putida S16 chromosome, complete genome	RNA polymerase sigma factor RpoD	6e-17	87.8
NC_010278:1625695:1649248	1649248	1651107	1860	Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,	RNA polymerase sigma factor RpoD	7e-17	87.8
NC_011146:3089297:3106852	3106852	3107853	1002	Geobacter bemidjiensis Bem, complete genome	RNA polymerase, sigma 70 subunit, RpoD family	9e-17	87.4
NC_010723:915697:915697	915697	916821	1125	Clostridium botulinum E3 str. Alaska E43, complete genome	RNA polymerase sigma factor RpoD	8e-17	87.4
NC_014562:2563466:2602488	2602488	2603480	993	Pantoea vagans C9-1 chromosome, complete genome	RNA polymerase sigma factor rpoD	8e-17	87.4
NC_009439:4404942:4404942	4404942	4406789	1848	Pseudomonas mendocina ymp, complete genome	RNA polymerase sigma factor RpoD	7e-17	87.4
NC_009053:1668500:1688201	1688201	1690060	1860	Actinobacillus pleuropneumoniae L20, complete genome	RNA polymerase sigma factor 70	7e-17	87.4
NC_008463:632869:647191	647191	649044	1854	Pseudomonas aeruginosa UCBPP-PA14, complete genome	sigma factor RpoD	1e-16	87
NC_016785:1357500:1396615	1396615	1397604	990	Corynebacterium diphtheriae CDCE 8392 chromosome, complete genome	RNA polymerase sigma factor B	1e-16	86.7
NC_016782:1385800:1418463	1418463	1419452	990	Corynebacterium diphtheriae 241 chromosome, complete genome	RNA polymerase sigma factor B	1e-16	86.7
NC_002935:1378566:1430121	1430121	1431110	990	Corynebacterium diphtheriae NCTC 13129, complete genome	RNA polymerase sigma factor	1e-16	86.7
NC_013961:851044:852228	852228	853220	993	Erwinia amylovora, complete genome	RNA polymerase sigma factor rpoS	1e-16	86.7
NC_008312:6801445:6821260	6821260	6822414	1155	Trichodesmium erythraeum IMS101, complete genome	RNA polymerase, sigma 28 subunit	1e-16	86.7
NC_010694:2971170:2999773	2999773	3000765	993	Erwinia tasmaniensis, complete genome	RNA polymerase sigma factor RpoS	1e-16	86.7
NC_015379:6226661:6226661	6226661	6228508	1848	Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,	RNA polymerase sigma factor (sigma-70)	1e-16	86.7
NC_016786:1359064:1418728	1418728	1419717	990	Corynebacterium diphtheriae HC01 chromosome, complete genome	RNA polymerase sigma factor B	1e-16	86.7
NC_016787:1350676:1410041	1410041	1411030	990	Corynebacterium diphtheriae HC03 chromosome, complete genome	RNA polymerase sigma factor B	1e-16	86.7
NC_016789:1432000:1463967	1463967	1464956	990	Corynebacterium diphtheriae PW8 chromosome, complete genome	RNA polymerase sigma factor B	1e-16	86.7
NC_016783:1397975:1439055	1439055	1440044	990	Corynebacterium diphtheriae INCA 402 chromosome, complete genome	RNA polymerase sigma factor B	1e-16	86.7
NC_016802:1317365:1403254	1403254	1404243	990	Corynebacterium diphtheriae HC02 chromosome, complete genome	RNA polymerase sigma factor B	1e-16	86.7
NC_016801:1422500:1460257	1460257	1461246	990	Corynebacterium diphtheriae C7 (beta) chromosome, complete genome	RNA polymerase sigma factor B	1e-16	86.7
NC_016800:1411000:1446604	1446604	1447593	990	Corynebacterium diphtheriae BH8 chromosome, complete genome	RNA polymerase sigma factor B	1e-16	86.7
NC_016790:1345638:1386108	1386108	1387097	990	Corynebacterium diphtheriae VA01 chromosome, complete genome	RNA polymerase sigma factor B	1e-16	86.7
NC_016788:1376000:1413506	1413506	1414495	990	Corynebacterium diphtheriae HC04 chromosome, complete genome	RNA polymerase sigma factor B	1e-16	86.7
NC_012918:1814000:1815755	1815755	1816756	1002	Geobacter sp. M21 chromosome, complete genome	RpoD subfamily RNA polymerase sigma-70 subunit	2e-16	86.3
NC_013171:1194500:1219236	1219236	1221044	1809	Anaerococcus prevotii DSM 20548, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	2e-16	86.3
NC_009482:87193:95821	95821	96795	975	Synechococcus sp. RCC307 chromosome, complete genome	sigma-70 family RNA polymerase sigma factor	2e-16	86.3
NC_007508:4476726:4490897	4490897	4492774	1878	Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome	RNA polymerase sigma factor	3e-16	85.9
NC_016818:749673:750744	750744	751730	987	Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, complete	RNA polymerase sigma factor RpoS	3e-16	85.9
NC_016781:1327516:1327516	1327516	1328505	990	Corynebacterium pseudotuberculosis 3/99-5 chromosome, complete	RNA polymerase sigma factor sigB	3e-16	85.9
NC_016932:1309644:1312401	1312401	1313390	990	Corynebacterium pseudotuberculosis 316 chromosome, complete genome	RNA polymerase sigma factor sigB	3e-16	85.9
NC_007912:909112:925981	925981	927822	1842	Saccharophagus degradans 2-40, complete genome	putative transcriptional regulator, Fis family	2e-16	85.9
NC_007413:1405817:1426867	1426867	1428117	1251	Anabaena variabilis ATCC 29413, complete genome	RNA polymerase sigma-like factor	3e-16	85.5
NC_007005:5500196:5502219	5502219	5504069	1851	Pseudomonas syringae pv. syringae B728a, complete genome	RNA polymerase sigma factor	3e-16	85.5
NC_004578:568236:588846	588846	590696	1851	Pseudomonas syringae pv. tomato str. DC3000, complete genome	RNA polymerase sigma factor	3e-16	85.5
NC_009831:1539159:1540150	1540150	1541121	972	Shewanella sediminis HAW-EB3, complete genome	RNA polymerase, sigma 70 subunit, RpoD family	3e-16	85.5
NC_009952:2381601:2381601	2381601	2383595	1995	Dinoroseobacter shibae DFL 12, complete genome	RNA polymerase sigma factor	4e-16	85.5
NC_007517:1561466:1588651	1588651	1589631	981	Geobacter metallireducens GS-15, complete genome	sigma 28 (Flagella/Sporulation)	4e-16	85.1
NC_009434:796878:813846	813846	815555	1710	Pseudomonas stutzeri A1501, complete genome	RNA polymerase sigma factor RpoD	4e-16	85.1
NC_009483:3024115:3042895	3042895	3043905	1011	Geobacter uraniireducens Rf4 chromosome, complete genome	RpoD family RNA polymerase sigma factor	4e-16	85.1
NC_007086:4489153:4499598	4499598	4501472	1875	Xanthomonas campestris pv. campestris str. 8004, complete genome	RNA polymerase sigma factor	4e-16	85.1
NC_003902:4430621:4442015	4442015	4443889	1875	Xanthomonas campestris pv. campestris str. ATCC 33913, complete	RNA polymerase sigma factor RpoD	4e-16	85.1
NC_009929:58465:80091	80091	80900	810	Acaryochloris marina MBIC11017 plasmid pREB4, complete sequence	RNA polymerase sigma-70 factor, putative	5e-16	84.7
NC_007645:6407370:6411603	6411603	6413522	1920	Hahella chejuensis KCTC 2396, complete genome	RNA polymerase sigma-70 factor RpoD	5e-16	84.7
NC_014484:1163576:1170458	1170458	1172200	1743	Spirochaeta thermophila DSM 6192 chromosome, complete genome	RNA polymerase sigma factor	6e-16	84.7
NC_008702:1153344:1172633	1172633	1173568	936	Azoarcus sp. BH72, complete genome	putative RNA polymerase sigma factor	6e-16	84.3
NC_012918:2758775:2790050	2790050	2791027	978	Geobacter sp. M21 chromosome, complete genome	RpoD subfamily RNA polymerase sigma-70 subunit	8e-16	84
NC_019748:4129500:4144777	4144777	4146027	1251	Stanieria cyanosphaera PCC 7437, complete genome	RNA polymerase, sigma subunit, RpsC/SigC	8e-16	84
NC_011969:3627980:3654068	3654068	3654787	720	Bacillus cereus Q1 chromosome, complete genome	sporulation sigma factor sige	1e-15	84
NC_008260:2340824:2350147	2350147	2352048	1902	Alcanivorax borkumensis SK2, complete genome	RNA polymerase sigma factor RpoD	2e-15	83.2
NC_010995:2547164:2553509	2553509	2554516	1008	Cellvibrio japonicus Ueda107, complete genome	RNA polymerase sigma factor RpoS	1e-15	83.2
NC_002971:1523065:1541273	1541273	1543369	2097	Coxiella burnetii RSA 493, complete genome	RNA polymerase sigma factor RpoD	1e-15	83.2
NC_009727:357206:377250	377250	379346	2097	Coxiella burnetii Dugway 7E9-12, complete genome	RNA polymerase sigma factor RpoD	1e-15	83.2
NC_007947:2447635:2479188	2479188	2481122	1935	Methylobacillus flagellatus KT, complete genome	sigma 70 (RpoD)	1e-15	83.2
NC_017033:276741:290351	290351	292231	1881	Frateuria aurantia DSM 6220 chromosome, complete genome	sigma-70 family RNA polymerase sigma factor	2e-15	82.8
NC_011071:4000620:4024096	4024096	4025952	1857	Stenotrophomonas maltophilia R551-3, complete genome	RNA polymerase, sigma 70 subunit, RpoD	2e-15	82.4
NC_012968:2228943:2243624	2243624	2245564	1941	Methylotenera mobilis JLW8, complete genome	RNA polymerase, sigma 70 subunit, RpoD	3e-15	82.4
NC_015947:3991696:4005239	4005239	4007092	1854	Burkholderia sp. JV3 chromosome, complete genome	RNA polymerase sigma-70 subunit RpoD	4e-15	82
NC_006576:12230:14434	14434	15384	951	Synechococcus elongatus PCC 6301, complete genome	group2 RNA polymerase sigma factor RpoD6	3e-15	82
NC_007604:1586243:1613464	1613464	1614396	933	Synechococcus elongatus PCC 7942, complete genome	principal RNA polymerase sigma factor SigA	3e-15	82
NC_012751:1538500:1553846	1553846	1554853	1008	Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete	RNA polymerase, sigma S (sigma 38) factor	4e-15	81.6
NC_014733:2363838:2377778	2377778	2379694	1917	Methylovorus sp. MP688 chromosome, complete genome	RNA polymerase, sigma 70 subunit, rpod	4e-15	81.6
NC_012969:2476318:2508883	2508883	2510799	1917	Methylovorus glucosetrophus SIP3-4 chromosome, complete genome	RNA polymerase sigma-70 subunit RpoD	4e-15	81.6
NC_014150:233194:241288	241288	242106	819	Brachyspira murdochii DSM 12563 chromosome, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG	4e-15	81.6
NC_009930:4909:29318	29318	30124	807	Acaryochloris marina MBIC11017 plasmid pREB5, complete sequence	RNA polymerase sigma-70 factor	5e-15	81.3
NC_006351:2398403:2406884	2406884	2408926	2043	Burkholderia pseudomallei K96243 chromosome 2, complete sequence	RNA polymerase sigma factor	6e-15	81.3
NC_009255:1071868:1076072	1076072	1078501	2430	Burkholderia vietnamiensis G4 chromosome 2, complete sequence	RNA polymerase sigma factor RpoD	8e-15	80.9
NC_010805:530876:535029	535029	537443	2415	Burkholderia multivorans ATCC 17616 chromosome 2, complete	RNA polymerase primary sigma factor	8e-15	80.9
NC_010086:1907959:1937861	1937861	1940275	2415	Burkholderia multivorans ATCC 17616 chromosome 2, complete	RNA polymerase, sigma 70 subunit, RpoD	8e-15	80.9
NC_007650:722961:725844	725844	728246	2403	Burkholderia thailandensis E264 chromosome II, complete sequence	RNA polymerase sigma factor RpoD	7e-15	80.9
NC_009078:2351046:2359522	2359522	2361732	2211	Burkholderia pseudomallei 1106a chromosome II, complete sequence	RNA polymerase sigma factor RpoD	7e-15	80.9
NC_009075:2428248:2436729	2436729	2438939	2211	Burkholderia pseudomallei 668 chromosome II, complete sequence	RNA polymerase sigma factor RpoD	7e-15	80.9
NC_007435:1077792:1089393	1089393	1091795	2403	Burkholderia pseudomallei 1710b chromosome II, complete sequence	RNA polymerase sigma factor	9e-15	80.5
NC_012721:1986436:2004708	2004708	2007125	2418	Burkholderia glumae BGR1 chromosome 2, complete genome	RNA polymerase, sigma 70 subunit, RpoD family protein	9e-15	80.5
NC_007410:112074:126026	126026	126970	945	Anabaena variabilis ATCC 29413 plasmid A, complete sequence	Sigma-70	9e-15	80.5
NC_016625:1259778:1274704	1274704	1276917	2214	Burkholderia sp. YI23 chromosome 2, complete sequence	RNA polymerase sigma-70 subunit RpoD	9e-15	80.5
NC_010552:752007:756205	756205	758622	2418	Burkholderia ambifaria MC40-6 chromosome 2, complete sequence	RNA polymerase, sigma 70 subunit, RpoD	9e-15	80.5
NC_010003:795355:837052	837052	838296	1245	Petrotoga mobilis SJ95, complete genome	RNA polymerase, sigma 70 subunit, RpoD family	1e-14	80.1
NC_014220:837926:841866	841866	842591	726	Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily	2e-14	79.7
NC_016799:1439000:1470273	1470273	1471262	990	Corynebacterium diphtheriae 31A chromosome, complete genome	RNA polymerase sigma factor B	2e-14	79.7
NC_007974:1135863:1146392	1146392	1148245	1854	Ralstonia metallidurans CH34 chromosome 2, complete sequence	sigma 70 (RpoD)	3e-14	79
NC_017243:1499757:1514416	1514416	1515243	828	Brachyspira intermedia PWS/A chromosome, complete genome	RNA polymerase sigma factor WhiG	3e-14	79
NC_012778:841934:853378	853378	854136	759	Eubacterium eligens ATCC 27750, complete genome	phosphatidylserine decarboxylase	3e-14	78.6
NC_008820:2595500:2614605	2614605	2615735	1131	Prochlorococcus marinus str. MIT 9303, complete genome	Putative type II alternative RNA polymerase sigma factor	3e-14	78.6
NC_009074:94000:116943	116943	118391	1449	Burkholderia pseudomallei 668 chromosome I, complete sequence	RNA polymerase sigma factor RpoD	5e-14	78.2
NC_013016:1441424:1443383	1443383	1445311	1929	Neisseria meningitidis alpha14 chromosome, complete genome	RNA polymerase sigma factor RpoD	5e-14	78.2
NC_017518:1610803:1612761	1612761	1614689	1929	Neisseria meningitidis NZ-05/33 chromosome, complete genome	RNA polymerase sigma factor rpoD	5e-14	78.2
NC_014355:399938:401142	401142	402401	1260	Candidatus Nitrospira defluvii, complete genome	RNA polymerase sigma-70 factor	5e-14	78.2
NC_017511:602000:616701	616701	618629	1929	Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genome	RNA polymerase sigma factor RpoD	5e-14	78.2
NC_012225:377441:389172	389172	389999	828	Brachyspira hyodysenteriae WA1, complete genome	RNA polymerase sigma factor WhiG	4e-14	78.2
NC_014962:4479989:4495341	4495341	4496174	834	Isosphaera pallida ATCC 43644 chromosome, complete genome	RNA polymerase sigma-38 subunit RpoS	1e-13	77
NC_000911:1284552:1301671	1301671	1302780	1110	Synechocystis sp. PCC 6803, complete genome	RNA polymerase sigma factor	2e-13	76.6
NC_017039:1283732:1300698	1300698	1301807	1110	Synechocystis sp. PCC 6803 substr. PCC-P, complete genome	RNA polymerase sigma factor	2e-13	76.6
NC_017052:1283720:1300686	1300686	1301795	1110	Synechocystis sp. PCC 6803 substr. PCC-N, complete genome	RNA polymerase sigma factor	2e-13	76.6
NC_017277:1283477:1300488	1300488	1301597	1110	Synechocystis sp. PCC 6803, complete genome	RNA polymerase sigma factor	2e-13	76.6
NC_020291:1389114:1392567	1392567	1393274	708	Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome	RNA polymerase sigma-E factor SigE	1e-13	76.6
NC_011661:1332309:1332309	1332309	1333550	1242	Dictyoglomus turgidum DSM 6724, complete genome	putative RNA polymerase, sigma 70 family subunit	1e-13	76.6
NC_007298:2689731:2719020	2719020	2719949	930	Dechloromonas aromatica RCB, complete genome	RNA polymerase sigma factor	1e-13	76.6
NC_009659:543000:545965	545965	548445	2481	Janthinobacterium sp. Marseille chromosome, complete genome	RNA polymerase primary sigma factor	2e-13	76.3
NC_012806:105133:111990	111990	113591	1602	Mycoplasma conjunctivae, complete genome	RNA polymerase sigma factor	2e-13	75.9
NC_007516:2383097:2407948	2407948	2409081	1134	Synechococcus sp. CC9605, complete genome	possible type II alternative RNA polymerase sigma factor	3e-13	75.5
NC_013940:110340:117614	117614	118381	768	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete	RNA polymerase, sigma 28 subunit, FliA/WhiG family	4e-13	75.5
NC_015138:1582458:1597787	1597787	1600129	2343	Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete	RNA polymerase sigma-70 subunit RpoD	4e-13	75.5
NC_008752:1523768:1541468	1541468	1543813	2346	Acidovorax avenae subsp. citrulli AAC00-1, complete genome	RNA polymerase, sigma 70 subunit, RpoD family	4e-13	75.1
NC_003888:6103534:6121043	6121043	6121885	843	Streptomyces coelicolor A3(2), complete genome	sigma factor WhiG	6e-13	74.7
NC_009828:600349:632038	632038	632748	711	Thermotoga lettingae TMO, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG	6e-13	74.7
NC_009482:2109270:2130734	2130734	2131846	1113	Synechococcus sp. RCC307 chromosome, complete genome	sigma-70 family RNA polymerase sigma factor	5e-13	74.7
NC_009465:90000:121734	121734	123545	1812	Candidatus Vesicomyosocius okutanii HA, complete genome	DNA-directed RNA polymerase sigma-70 factor	6e-13	74.3
NC_016626:1669477:1686194	1686194	1688140	1947	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	RNA polymerase sigma-70 subunit RpoD	7e-13	74.3
NC_005125:182701:194739	194739	195809	1071	Gloeobacter violaceus PCC 7421, complete genome	group 2 sigma 70-type sigma factor	7e-13	74.3
NC_009138:1843998:1860878	1860878	1863304	2427	Herminiimonas arsenicoxydans, complete genome		1e-12	73.9
NC_015138:5046921:5053585	5053585	5056221	2637	Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete	RpoD subfamily RNA polymerase sigma-70 subunit	9e-13	73.9
NC_021177:6127431:6145158	6145158	6145994	837	Streptomyces fulvissimus DSM 40593, complete genome	RNA polymerase sigma factor WhiG	8e-13	73.9
NC_014323:961825:965140	965140	967692	2553	Herbaspirillum seropedicae SmR1 chromosome, complete genome	RNA polymerase sigma-70 factor transcription regulator protein	1e-12	73.6
NC_015856:1182974:1198779	1198779	1201274	2496	Collimonas fungivorans Ter331 chromosome, complete genome	RNA polymerase sigma factor	2e-12	72.8
NC_010572:2216309:2216309	2216309	2217145	837	Streptomyces griseus subsp. griseus NBRC 13350, complete genome	putative RNA polymerase sigma factor WhiG	3e-12	72.4
NC_010673:703816:755432	755432	757324	1893	Borrelia hermsii DAH, complete genome	RNA polymerase sigma factor RpoD	4e-12	72
NC_008710:703740:752668	752668	754560	1893	Borrelia turicatae 91E135, complete genome	RNA polymerase sigma factor RpoD	4e-12	72
NC_007651:72952:93414	93414	94865	1452	Burkholderia thailandensis E264 chromosome I, complete sequence	RNA polymerase sigma factor RpoD	3e-12	72
NC_007509:644000:659041	659041	661074	2034	Burkholderia sp. 383 chromosome 3, complete sequence	sigma 70 (RpoD)	4e-12	71.6
NC_014118:2316000:2320588	2320588	2322585	1998	Burkholderia sp. CCGE1002 chromosome chromosome 2, complete	RNA polymerase, sigma 70 subunit, RpoD	4e-12	71.6
NC_017095:166896:191492	191492	192247	756	Fervidobacterium pennivorans DSM 9078 chromosome, complete genome	RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG	4e-12	71.6
NC_010676:2869936:2882060	2882060	2884057	1998	Burkholderia phytofirmans PsJN chromosome 2, complete sequence	RNA polymerase, sigma 70 subunit, RpoD	5e-12	71.6
NC_013959:2449315:2470861	2470861	2472825	1965	Sideroxydans lithotrophicus ES-1 chromosome, complete genome	RNA polymerase, sigma 70 subunit, RpoD	7e-12	71.2
NC_011244:746801:766949	766949	768841	1893	Borrelia recurrentis A1, complete genome	RNA polymerase sigma factor RpoD	8e-12	70.9
NC_008700:312099:318764	318764	321673	2910	Shewanella amazonensis SB2B, complete genome	DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein	1e-11	70.5
NC_014657:914071:916231	916231	917052	822	Caldicellulosiruptor owensensis OL chromosome, complete genome	RNA polymerase, sigma 70 subunit, rpod subfamily	1e-11	70.1
NC_005042:1719055:1722731	1722731	1723750	1020	Prochlorococcus marinus subsp. marinus str. CCMP1375, complete	DNA-directed RNA polymerase sigma subunit	1e-11	70.1
NC_009091:1598044:1616615	1616615	1617634	1020	Prochlorococcus marinus str. MIT 9301, complete genome	Type II alternative RNA polymerase sigma factor, sigma-70 family	2e-11	69.7
NC_005070:2374850:2399426	2399426	2400412	987	Synechococcus sp. WH 8102, complete genome	Type II alternative RNA polymerase sigma factor, sigma-70 family	2e-11	69.7
NC_014330:697429:713067	713067	713921	855	Brachyspira pilosicoli 95/1000 chromosome, complete genome	DNA directed RNA polymerase sigma subunit	2e-11	69.3
NC_019908:2496149:2504685	2504685	2505539	855	Brachyspira pilosicoli P43/6/78 chromosome, complete genome	DNA directed RNA polymerase sigma subunit	2e-11	69.3
NC_014448:487381:504103	504103	505677	1575	Mycoplasma hyorhinis HUB-1 chromosome, complete genome	RNA polymerase sigma factor	3e-11	68.9
NC_008268:1748635:1757720	1757720	1759282	1563	Rhodococcus sp. RHA1, complete genome	sigma factor, sigma 70 type, probable group 2	3e-11	68.9
NC_009654:3849774:3870599	3870599	3871336	738	Marinomonas sp. MWYL1, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG	4e-11	68.6
NC_008710:819389:820347	820347	821150	804	Borrelia turicatae 91E135, complete genome	RNA polymerase sigma factor RpoS	5e-11	68.2
NC_021182:2883716:2890828	2890828	2891553	726	Clostridium pasteurianum BC1, complete genome	RNA polymerase sigma factor, FliA/WhiG family	7e-11	67.8
NC_020291:4903981:4918826	4918826	4919557	732	Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome	RNA polymerase sigma factor for flagellar operon	8e-11	67.4
NC_011653:1728000:1745028	1745028	1745708	681	Thermosipho africanus TCF52B, complete genome	RNA polymerase sigma factor for flagellar operon	8e-11	67.4
NC_014761:1321187:1321187	1321187	1322641	1455	Oceanithermus profundus DSM 14977 chromosome, complete genome	RNA polymerase, sigma 70 subunit, rpod subfamily	1e-10	67.4
NC_009674:2678932:2703448	2703448	2704176	729	Bacillus cytotoxicus NVH 391-98 chromosome, complete genome	FliA/WhiG family RNA polymerase sigma factor	1e-10	67
NC_015164:325212:344338	344338	345198	861	Bacteroides salanitronis DSM 18170 chromosome, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	1e-10	67
NC_011365:502620:519355	519355	520242	888	Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome	RNA polymerase factor sigma-32	2e-10	66.6
NC_010125:2295500:2311027	2311027	2312004	978	Gluconacetobacter diazotrophicus PAl 5, complete genome	putative RNA polymerase sigma-32 factor	2e-10	66.6
NC_015707:705628:706734	706734	707471	738	Thermotoga thermarum DSM 5069 chromosome, complete genome	RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG	2e-10	66.2
NC_012779:2281700:2298743	2298743	2299465	723	Edwardsiella ictaluri 93-146, complete genome	RNA polymerase sigma factor for flagellar operon	2e-10	66.2
NC_009523:2769154:2779011	2779011	2780207	1197	Roseiflexus sp. RS-1 chromosome, complete genome	RNA polymerase sigma-32 subunit RpoH	3e-10	65.5
NC_018677:111500:141428	141428	143164	1737	Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, complete	RNA polymerase sigma factor RpoD	3e-10	65.5
NC_003228:3212500:3215929	3215929	3216789	861	Bacteroides fragilis NCTC 9343, complete genome	putative sigma factor A	4e-10	65.1
NC_009930:152500:172464	172464	173747	1284	Acaryochloris marina MBIC11017 plasmid pREB5, complete sequence	hypothetical protein	4e-10	65.1
NC_013894:1380564:1401021	1401021	1401953	933	Thermocrinis albus DSM 14484 chromosome, complete genome	putative RNA polymerase, sigma 70 family subunit	6e-10	64.7
NC_021184:2238500:2250565	2250565	2251368	804	Desulfotomaculum gibsoniae DSM 7213, complete genome	RNA polymerase sigma factor, FliA/WhiG family	8e-10	64.3
NC_010002:1879220:1883976	1883976	1884920	945	Delftia acidovorans SPH-1, complete genome	RNA polymerase, sigma 32 subunit, RpoH	8e-10	64.3
NC_013510:3065000:3081198	3081198	3082280	1083	Thermomonospora curvata DSM 43183, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	9e-10	63.9
NC_009614:3476000:3494918	3494918	3495778	861	Bacteroides vulgatus ATCC 8482 chromosome, complete genome	RNA polymerase sigma factor rpoD	9e-10	63.9
NC_016641:3217201:3230568	3230568	3231518	951	Paenibacillus terrae HPL-003 chromosome, complete genome	RNA polymerase sigma factor	1e-09	63.9
NC_009348:381752:391444	391444	392151	708	Aeromonas salmonicida subsp. salmonicida A449, complete genome	LafS	2e-09	62.8
NC_016510:871000:877846	877846	878709	864	Flavobacterium columnare ATCC 49512 chromosome, complete genome	RpoD family RNA polymerase sigma factor	2e-09	62.8
NC_015496:2155816:2159080	2159080	2159943	864	Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genome	RNA polymerase, sigma 70 subunit, RpoD subfamily	2e-09	62.8
NC_010001:3266561:3275119	3275119	3275883	765	Clostridium phytofermentans ISDg, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG	3e-09	62.4
NC_013592:1730505:1749091	1749091	1749813	723	Dickeya dadantii Ech586, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily	3e-09	62.4
NC_014377:1089894:1099241	1099241	1099978	738	Thermosediminibacter oceani DSM 16646 chromosome, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily	3e-09	62.4
NC_015638:591964:593277	593277	594140	864	Lacinutrix sp. 5H-3-7-4 chromosome, complete genome	RpoD subfamily RNA polymerase sigma-70 subunit	3e-09	62
NC_014500:3023762:3035272	3035272	3035994	723	Dickeya dadantii 3937 chromosome, complete genome	RNA polymerase sigma-28 (sigma F) factor	5e-09	61.6
NC_011662:1160887:1163252	1163252	1164103	852	Thauera sp. MZ1T, complete genome	RNA polymerase, sigma 32 subunit, RpoH	5e-09	61.6
NC_020911:2921925:2957823	2957823	2958542	720	Octadecabacter antarcticus 307, complete genome	RNA polymerase sigma factor for flagellar operon	4e-09	61.6
NC_015714:768500:770767	770767	771555	789	Treponema paraluiscuniculi Cuniculi A chromosome, complete genome	DNA-directed RNA polymerase sigma subunit WhiG	7e-09	61.2
NC_016842:775368:777472	777472	778260	789	Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete	DNA-directed RNA polymerase sigma subunit WhiG	7e-09	61.2
NC_016843:775371:777659	777659	778447	789	Treponema pallidum subsp. pertenue str. Gauthier chromosome,	DNA-directed RNA polymerase sigma subunit WhiG	7e-09	61.2
NC_016848:775822:777926	777926	778714	789	Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete	DNA-directed RNA polymerase sigma subunit WhiG	7e-09	61.2
NC_007404:359764:363361	363361	364206	846	Thiobacillus denitrificans ATCC 25259, complete genome	sigma-70 factor	7e-09	61.2
NC_012880:1765920:1841248	1841248	1841970	723	Dickeya dadantii Ech703, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG	6e-09	61.2
NC_016514:2950860:2959071	2959071	2959790	720	Enterobacter cloacae EcWSU1 chromosome, complete genome	RNA polymerase sigma factor for flagellar operon	6e-09	61.2
NC_007298:778723:816228	816228	816974	747	Dechloromonas aromatica RCB, complete genome	Sigma-70 region 4	9e-09	60.8
NC_016844:775334:777826	777826	778614	789	Treponema pallidum subsp. pallidum DAL-1 chromosome, complete	DNA-directed RNA polymerase sigma subunit WhiG	8e-09	60.8
NC_017268:775000:777138	777138	777926	789	Treponema pallidum subsp. pallidum str. Chicago chromosome,	RNA polymerase sigma factor WhiG	8e-09	60.8
NC_021508:775264:777368	777368	778156	789	Treponema pallidum subsp. pallidum SS14, complete genome	DNA-directed RNA polymerase sigma subunit WhiG	8e-09	60.8
NC_013956:2523955:2524510	2524510	2525232	723	Pantoea ananatis LMG 20103 chromosome, complete genome	FliA	8e-09	60.8
NC_016816:1912366:1944260	1944260	1944982	723	Pantoea ananatis LMG 5342, complete genome	RNA polymerase sigma factor for flagellar operon	8e-09	60.8
NC_012912:1788308:1810429	1810429	1811151	723	Dickeya zeae Ech1591, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG	8e-09	60.8
NC_015167:724934:728042	728042	728905	864	Cellulophaga lytica DSM 7489 chromosome, complete genome	RpoD subfamily RNA polymerase sigma 70 subunit	7e-09	60.8
NC_014330:2457731:2458682	2458682	2459626	945	Brachyspira pilosicoli 95/1000 chromosome, complete genome	RNA polymerase sigma factor RpoD	1e-08	60.5
NC_000919:773784:775888	775888	776676	789	Treponema pallidum subsp. pallidum str. Nichols, complete genome	sigma factor WhiG	1e-08	60.5
NC_010741:775000:777336	777336	778124	789	Treponema pallidum subsp. pallidum SS14, complete genome	RNA polymerase sigma-28 factor	1e-08	60.5
NC_004547:1970686:1986118	1986118	1986840	723	Erwinia carotovora subsp. atroseptica SCRI1043, complete genome	flagellar biosynthesis sigma factor FliA	1e-08	60.5
NC_019908:748635:781082	781082	782008	927	Brachyspira pilosicoli P43/6/78 chromosome, complete genome	RNA polymerase sigma factor RpoD	1e-08	60.1
NC_018604:1385788:1385788	1385788	1386714	927	Brachyspira pilosicoli WesB complete genome	RNA polymerase sigma factor RpoD	1e-08	60.1
NC_018607:1185195:1186146	1186146	1187072	927	Brachyspira pilosicoli B2904 chromosome, complete genome	RpoD subfamily RNA polymerase sigma-70 subunit	1e-08	60.1
UCMB5137:2054735:2060233	2060233	2060961	729	Bacillus atrophaeus UCMB-5137	sporulation sigma factor SigK	2e-08	59.7
CP002207:2169277:2171496	2171496	2172224	729	Bacillus atrophaeus 1942, complete genome	sporulation sigma factor SigK	2e-08	59.7
NC_014639:2169277:2171496	2171496	2172224	729	Bacillus atrophaeus 1942 chromosome, complete genome	sporulation sigma factor SigK	2e-08	59.7
NC_017249:2073558:2079166	2079166	2080077	912	Bradyrhizobium japonicum USDA 6, complete genome	hypothetical protein	3e-08	59.3
NC_007759:1356439:1364764	1364764	1365549	786	Syntrophus aciditrophicus SB, complete genome	RNA polymerase flagellar sigma factor	3e-08	59.3
NC_017191:2514401:2518059	2518059	2518787	729	Bacillus amyloliquefaciens XH7 chromosome, complete genome	sporulation sigma factor SigK	3e-08	59.3
NC_017188:2512357:2516018	2516018	2516743	726	Bacillus amyloliquefaciens TA208 chromosome, complete genome	sporulation sigma factor SigK	2e-08	59.3
NC_013960:2261487:2278170	2278170	2279033	864	Nitrosococcus halophilus Nc4 chromosome, complete genome	RNA polymerase sigma factor RpoH	4e-08	58.9
NC_016047:2631511:2634084	2634084	2634812	729	Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete	RNA polymerase sigma-K factor	3e-08	58.9
NC_014479:2505823:2509027	2509027	2509755	729	Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete	sporulation sigma factor SigmaK	3e-08	58.9
NC_017195:2498113:2500619	2500619	2501347	729	Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, complete	RNA polymerase sigma-K factor	3e-08	58.9
NC_008346:983816:996574	996574	997356	783	Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete	putative RNA polymerase sigma factor	3e-08	58.9
NC_019978:2036779:2054211	2054211	2054906	696	Halobacteroides halobius DSM 5150, complete genome	RNA polymerase sigma-K factor	3e-08	58.9
NC_010118:207843:206791	206791	207846	1056	Candidatus Sulcia muelleri GWSS, complete genome	RNA polymerase sigma factor rpoD	3e-08	58.9
NC_014393:4352216:4355487	4355487	4356770	1284	Clostridium cellulovorans 743B chromosome, complete genome	RNA polymerase, sigma 32 subunit, RpoH	3e-08	58.9
NC_009725:2517428:2521850	2521850	2522572	723	Bacillus amyloliquefaciens FZB42, complete genome	SpoIIIC	3e-08	58.9
NC_020410:2509057:2511851	2511851	2512573	723	Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete	RNA polymerase sigma-K factor	3e-08	58.9
NC_006322:2658587:2662574	2662574	2663299	726	Bacillus licheniformis ATCC 14580, complete genome	SpoIIIC	4e-08	58.5
NC_006270:2657726:2661713	2661713	2662438	726	Bacillus licheniformis ATCC 14580, complete genome	RNA polymerase sporulation-specific sigma factor (sigma-K) (C-terminal half)	4e-08	58.5
NC_014551:2510000:2515157	2515157	2515879	723	Bacillus amyloliquefaciens DSM 7, complete genome	RNA polymerase sporulation-specific sigma-K factor precursor (Sigma-27) (C-terminal fragment)	4e-08	58.5
NC_020272:1384525:1400544	1400544	1401266	723	Bacillus amyloliquefaciens IT-45, complete genome	sporulation sigma factor SigK	4e-08	58.5
NC_011386:136223:155169	155169	156332	1164	Oligotropha carboxidovorans OM5, complete genome	RNA polymerase sigma factor RpoD	6e-08	58.2
NC_015684:362236:372374	372374	373540	1167	Oligotropha carboxidovorans OM5 chromosome, complete genome		6e-08	58.2
NC_012559:731859:747206	747206	747949	744	Laribacter hongkongensis HLHK9, complete genome	FliA1	7e-08	57.8
NC_010688:2532929:2554334	2554334	2555101	768	Xanthomonas campestris pv. campestris, complete genome	RNA polymerase sigma factor rpoD (Sigma-70).	7e-08	57.8
NC_003902:2211790:2229977	2229977	2230744	768	Xanthomonas campestris pv. campestris str. ATCC 33913, complete	RNA polymerase sigma factor	7e-08	57.8
NC_007644:1603696:1616288	1616288	1616968	681	Moorella thermoacetica ATCC 39073, complete genome	sigma 28 (Flagella/Sporulation)	8e-08	57.4
NC_007716:225535:242894	242894	243499	606	Aster yellows witches'-broom phytoplasma AYWB, complete genome	RNA polymerase sigma factor	1e-07	57
NC_014910:4026613:4047723	4047723	4048439	717	Alicycliphilus denitrificans BC chromosome, complete genome	RNA polymerase sigma factor, flia/whig family	1e-07	57
NC_015422:4395388:4415992	4415992	4416708	717	Alicycliphilus denitrificans K601 chromosome, complete genome	RNA polymerase sigma 28 subunit FliA/WhiG	1e-07	57
NC_008601:1151653:1153614	1153614	1154492	879	Francisella tularensis subsp. novicida U112, complete genome	RNA polymerase sigma-32 factor	2e-07	56.6
NC_015581:1791658:1792421	1792421	1793278	858	Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome	RNA polymerase, sigma 32 subunit, RpoH	2e-07	56.2
NC_009664:570768:581858	581858	582718	861	Kineococcus radiotolerans SRS30216, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG	3e-07	55.8
NC_003919:2233000:2258166	2258166	2258933	768	Xanthomonas axonopodis pv. citri str. 306, complete genome	RNA polymerase sigma factor	3e-07	55.8
NC_017267:2326443:2346511	2346511	2347278	768	Xanthomonas oryzae pv. oryzicola BLS256 chromosome, complete	RNA polymerase sigma factor	3e-07	55.8
NC_007508:2234080:2251433	2251433	2252200	768	Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome	RNA polymerase sigma factor for flagellar operon FliA	2e-07	55.8
NC_015222:1127675:1128577	1128577	1129293	717	Nitrosomonas sp. AL212 chromosome, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG	3e-07	55.5
NC_010814:155834:170098	170098	170940	843	Geobacter lovleyi SZ, complete genome	putative RNA polymerase, sigma 70 family subunit	4e-07	55.5
NC_014311:1:7725	7725	10448	2724	Ralstonia solanacearum PSI07 chromosome, complete genome	RNA polymerase sigma factor	5e-07	55.1
NC_008609:112340:130809	130809	131687	879	Pelobacter propionicus DSM 2379, complete genome	RNA polymerase, sigma 32 subunit, RpoH	1e-06	53.9
NC_012917:2921932:2928196	2928196	2928918	723	Pectobacterium carotovorum subsp. carotovorum PC1, complete genome	RNA polymerase, sigma 28 subunit, FliA/WhiG	1e-06	53.9
NC_005070:1144777:1157952	1157952	1158668	717	Synechococcus sp. WH 8102, complete genome	hypothetical protein	1e-06	53.5
NC_008800:2695977:2713994	2713994	2714716	723	Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,	flagellar biosynthesis sigma factor	2e-06	53.1
NC_015224:2017781:2039065	2039065	2039787	723	Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,	flagellar biosynthesis sigma factor	2e-06	53.1
NC_011761:2067695:2087899	2087899	2088756	858	Acidithiobacillus ferrooxidans ATCC 23270 chromosome, complete	RNA polymerase sigm-70 factor family	2e-06	52.8
NC_009952:2752500:2772541	2772541	2773437	897	Dinoroseobacter shibae DFL 12, complete genome	RNA polymerase	4e-06	52
NC_016148:576946:580786	580786	581376	591	Thermovirga lienii DSM 17291 chromosome, complete genome	FliA/WhiG subfamily RNA polymerase sigma-28 subunit	6e-06	51.6
NC_014623:4535544:4575048	4575048	4575938	891	Stigmatella aurantiaca DW4/3-1 chromosome, complete genome	RNA polymerase sigma-b factor	5e-06	51.6
NC_019842:2575000:2577862	2577862	2578509	648	Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,	sporulation sigma factor SigK	5e-06	51.6
NC_015391:2059191:2072394	2072394	2073110	717	Carnobacterium sp. 17-4 chromosome, complete genome	RNA polymerase sigma factor SigD	8e-06	50.8
NC_006582:2944237:2981606	2981606	2982268	663	Bacillus clausii KSM-K16, complete genome	DNA-directed RNA polymerase sigma factor	9e-06	50.8
NC_008783:119758:141073	141073	141984	912	Bartonella bacilliformis KC583, complete genome	RNA polymerase sigma-32 factor	1e-05	50.4

*Host Accession, e.g.* NC_0123..**	*Host Description, e.g.* Clostri...**

*Host Lineage, e.g.* archae, Proteo, Firmi...**

*Host Information, e.g.* soil, Thermo, Russia**