Pre_GI Gene

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Host: NC_007005 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007005:5500196 Pseudomonas syringae pv. syringae B728a, complete genome

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
550019655021511956DNA primaseQuickGO ontologyBLASTP
550221955040691851RNA polymerase sigma factorQuickGO ontologyBLASTP
550433855068242487PASGGDEFQuickGO ontologyBLASTP
55070435508014972conjugal transfer proteinQuickGO ontologyBLASTP
55086645509014351Plasmid stabilization systemQuickGO ontologyBLASTP
55090275509275249Prevent-host-death proteinQuickGO ontologyBLASTP
55096225510575954Phage integrasePhage integrase N-terminal SAM-likeQuickGO ontologyBLASTP
55106015510921321hypothetical proteinBLASTP
55109885511227240hypothetical protein
55113075511816510GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
551323655151671932S-type PyocinQuickGO ontologyBLASTP
55151725515447276Colicin immunity proteinpyocin immunity proteinQuickGO ontologyBLASTP
55159125516160249hypothetical protein
55162125516463252hypothetical protein
55169785517334357hypothetical protein
55176175517946330hypothetical proteinBLASTP
551922955207791551type III effector HopAB1QuickGO ontology
55215055522320816Formatenitrite transporterQuickGO ontologyBLASTP
55224675523099633similar to Phosphopantetheinyl transferaseQuickGO ontologyBLASTP
552309655271364041Amino acid adenylationQuickGO ontologyBLASTP