Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:2219286 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22192862220032747DNA repair protein RecOQuickGO ontologyBLASTP
22200342220636603translation elongation factor TsQuickGO ontologyBLASTP
22209082221543636CBS domain-containing proteinQuickGO ontologyBLASTP
222161822242482631pyruvate phosphate dikinaseQuickGO ontologyBLASTP
222436022254121053spore coat protein CotS familyQuickGO ontologyBLASTP
222572822267561029deoxyguanosinetriphosphate triphosphohydrolase putativeQuickGO ontologyBLASTP
222707322288451773DNA primase catalytic coreQuickGO ontologyBLASTP
222886722299881122RNA polymerase sigma factor sigma-70 familyQuickGO ontologyBLASTP
22300932230983891Protein of unknown function DUF2679QuickGO ontologyBLASTP
22312082231897690putative SAM-dependent methyltransferaseQuickGO ontologyBLASTP
22318882232703816dinuclear metal center protein YbgISA1388 familyQuickGO ontologyBLASTP
22328182233552735Zn-ribbon protein possibly nucleic acid-binding proteinQuickGO ontologyBLASTP
223431322354911179cystathionine beta-lyasecystathionine gamma-synthaseQuickGO ontologyBLASTP
22356442236543900DMTdrugmetabolite transporter superfamily permeaseQuickGO ontologyBLASTP
223710122384681368permeaseQuickGO ontologyBLASTP
223851122401691659acetolactate synthase large subunit biosynthetic typeQuickGO ontologyBLASTP
224114622421501005ketol-acid reductoisomeraseQuickGO ontologyBLASTP