Pre_GI Gene

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Host: NC_006576 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006576:12230 Synechococcus elongatus PCC 6301, complete genome

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1223012823594ATP-dependent Clp protease proteolytic subunitQuickGO ontologyBLASTP
1287613718843hypothetical proteinBLASTP
1375614418663hypothetical proteinBLASTP
1443415384951group2 RNA polymerase sigma factor RpoD6QuickGO ontologyBLASTP
16117172411125hypothetical proteinBLASTP
1725417928675hypothetical proteinBLASTP
1810418262159hypothetical proteinBLASTP
1915119696546hypothetical proteinBLASTP
1977020447678hypothetical proteinBLASTP
2206522481417signal transduction inhibitorQuickGO ontologyBLASTP
2287223189318hypothetical proteinBLASTP
2391224379468hypothetical proteinBLASTP
24418266132196polyphosphate kinaseQuickGO ontologyBLASTP
2732627565240hypothetical proteinBLASTP
2762328141519hypothetical proteinBLASTP
28175304182244copper transporting CPx-type ATPase PacSQuickGO ontologyBLASTP
3103231841810pore-forming membrane proteinQuickGO ontologyBLASTP
32308338941587dehydrogenase subunit-like proteinQuickGO ontologyBLASTP
33963347638013-oxoacyl-acyl-carrier protein reductaseQuickGO ontologyBLASTP
34864375362673probable glucosidaseQuickGO ontologyBLASTP
37549395942046glycogen debranching enzyme-related proteinQuickGO ontologyBLASTP