Pre_GI Gene

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Host: NC_009708 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009708:633054 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6330546349551902fusaric acid resistance domain-containing proteinQuickGO ontologyBLASTP
6349396359881050multidrug resistance protein MdtNQuickGO ontologyBLASTP
635998636324327hypothetical proteinBLASTP
636330636530201hypothetical proteinBLASTP
6373176385281212aspartate aminotransferaseQuickGO ontologyBLASTP
6385216399721452NaH antiporter family proteinQuickGO ontologyBLASTP
639985640422438hypothetical proteinBLASTP
640556641188633hypothetical proteinBLASTP
641199641579381endoribonuclease L-PSPQuickGO ontologyBLASTP
641864642268405L-PSP family endoribonucleaseQuickGO ontologyBLASTP
642483642785303hypothetical proteinBLASTP
643045643647603hypothetical proteinBLASTP
643712643837126hypothetical protein
643923644879957LysR family substrate binding transcriptional regulatorQuickGO ontologyBLASTP
645306645863558Fic family proteinQuickGO ontologyBLASTP
6461986473761179HNH endonuclease domain-containing proteinQuickGO ontologyBLASTP
647385647915531hypothetical proteinBLASTP
647929648402474hypothetical proteinBLASTP
648718649056339hypothetical proteinBLASTP
6495746514121839RNA polymerase sigma factor RpoDQuickGO ontologyBLASTP
6515706533181749DNA primaseQuickGO ontologyBLASTP