Pre_GI Gene

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Host: NC_008529 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008529:1042220 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete

Host Lineage: Lactobacillus delbrueckii; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactic acid bacterium used in the fermentation of dairy products. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. The subspecies bulgaricus is used as a starter culture for a number of fermented dairy products such as yogurt and Swiss and Italian-type cheeses, and is a thermophilic culture, where the optimum temperature is 42 degrees C.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10432861043819534Methylated DNA-protein cysteine methyltransferaseQuickGO ontologyBLASTP
10438461043953108hypothetical protein
1044118104418366hypothetical protein
10451741045833660Shikimate 5-dehydrogenaseQuickGO ontologyBLASTP
10459621046834873AraC-type DNA-binding proteinQuickGO ontologyBLASTP
1046940104701778hypothetical protein
10470571047479423hypothetical protein
104750210486441143Site-specific DNA methylaseQuickGO ontologyBLASTP
104889410500811188Type II restriction enzyme NgoFVII Endonuclease NgoFVIIQuickGO ontologyBLASTP
105009810519481851Predicted helicaseQuickGO ontologyBLASTP
10519781052400423Very-short-patch-repair endonucleaseQuickGO ontologyBLASTP
10525241053072549hypothetical protein
10531311053916786Predicted restriction endonucleaseQuickGO ontologyBLASTP
105430410565142211Cation transport ATPaseQuickGO ontologyBLASTP
105809210595821491hypothetical proteinBLASTP
105998110624942514hypothetical proteinBLASTP
10626171062796180hypothetical proteinBLASTP
10630011063414414Transposase DDE domainQuickGO ontologyBLASTP
10637481064014267hypothetical proteinBLASTP
106409010664742385Cation transport ATPaseQuickGO ontologyBLASTP
10674271067612186hypothetical proteinBLASTP
10678771068494618TransposaseQuickGO ontologyBLASTP
10685321069101570TransposaseQuickGO ontologyBLASTP
10702781070400123hypothetical protein
107041210715481137DNA-directed RNA polymerase sigma subunit sigma70sigma32QuickGO ontologyBLASTP
107158410727021119DNA-directed RNA polymerase sigma subunit sigma70sigma32QuickGO ontologyBLASTP
107267410745121839DNA primaseQuickGO ontologyBLASTP
107454410766102067Glycyl-tRNA synthetase beta subunitQuickGO ontologyBLASTP
10766031077514912Glycyl-tRNA synthetase alpha subunitQuickGO ontologyBLASTP
10777791078528750Recombinational DNA repair protein RecOQuickGO ontologyBLASTP
10785281079433906GTPaseQuickGO ontologyBLASTP
10794171079836420Cytidine deaminaseQuickGO ontologyBLASTP