Pre_GI Gene

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Host: NC_011071 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011071:4000620 Stenotrophomonas maltophilia R551-3, complete genome

Host Lineage: Stenotrophomonas maltophilia; Stenotrophomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: Stenotrophomonas maltophilia R551-3 was isolated from the poplar Populus trichocarpa x deltoides cv. "Hoogvorst" and is the second most common endophytic bacteria in poplar. Endophytic bacteria have been shown to increase plant growth or health but providing growth factors or nutrients and in aiding the degradation of toxic compounds. This species is an uncommon but serious source of infection in patients with breathing tubes such as endotracheal or tracheostomy tubes, or with chronically indwelling urinary catheters. Although the organism can colonize the devices without causing an infection, under certain conditions it can cause pneumonia, urinary tract infections, or an infection of the blood. This organism can also cause infection in immunocompromised patients. It has resistance to many commonly used antibiotics and therefore is often difficult to eradicate. Most strains are resistant to co-trimoxazole.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
400062040034542835TonB-dependent receptorQuickGO ontologyBLASTP
400371240047341023hypothetical proteinBLASTP
40047434005636894protein of unknown function DUF6 transmembraneQuickGO ontologyBLASTP
40057014006504804transcriptional regulator AraC familyQuickGO ontologyBLASTP
40065914007232642Glutathione S-transferase domainQuickGO ontologyBLASTP
40072544007661408hypothetical proteinBLASTP
40077114008130420histone family protein nucleoid-structuring protein H-NSQuickGO ontologyBLASTP
40082494008641393DoxX family proteinQuickGO ontologyBLASTP
40086664009352687hypothetical proteinBLASTP
40094134010039627hypothetical protein
401022440124702247hypothetical proteinBLASTP
401287940146931815OLD family ATP-dependent endonuclease-like proteinQuickGO ontologyBLASTP
401564540180292385Integrase catalytic regionQuickGO ontologyBLASTP
401802640190421017AAA ATPaseQuickGO ontologyBLASTP
401903940202561218hypothetical proteinBLASTP
4022238402231376tRNA-MetQuickGO ontologyBLASTP
402243840238441407HipA domain proteinQuickGO ontologyBLASTP
402409640259521857RNA polymerase sigma 70 subunit RpoDQuickGO ontologyBLASTP
40260434026483441D-tyrosyl-tRNATyr deacylaseQuickGO ontologyBLASTP
40265454027465921lipid A biosynthesis acyltransferaseQuickGO ontologyBLASTP
402754140286741134GTP cyclohydrolase IIQuickGO ontologyBLASTP
40287024029250549membrane-flanked domainQuickGO ontologyBLASTP
402924740307851539membrane-flanked domainQuickGO ontologyBLASTP
403086240319171056CDP-glycerolpolyglycerophosphate glycerophosphotransferaseQuickGO ontologyBLASTP