Pre_GI Gene

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Host: NC_016047 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016047:637778 Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete

Host Lineage: Bacillus subtilis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism was one of the first bacteria studied, and was named Vibrio subtilis in 1835 and renamed Bacillus subtilis in 1872. It is one of the most well characterized bacterial organisms, and is a model system for cell differentiation and development. This soil bacterium can divide asymmetrically, producing an endospore that is resistant to environmental factors such as heat, acid, and salt, and which can persist in the environment for long periods of time. The endospore is formed at times of nutritional stress, allowing the organism to persist in the environment until conditions become favorable. Prior to the decision to produce the spore the bacterium might become motile, through the production of flagella, and also take up DNA from the environment through the competence system. The sporulation process is complex and involves the coordinated regulation of hundreds of genes in the genome. This initial step results in the coordinated asymmetric cellular division and endospore formation through multiple stages that produces a single spore from the mother cell.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6377786387851008phosphoserine phosphatase RsbUQuickGO ontologyBLASTP
638847639176330anti-sigma-B factor antagonistQuickGO ontologyBLASTP
639173639655483anti-sigma B factorQuickGO ontologyBLASTP
639621640409789RNA polymerase sigma-B factorQuickGO ontologyBLASTP
640409641008600phosphoserine phosphatase RsbXQuickGO ontologyBLASTP
6411926433512160S1 RNA binding domain-containing proteinQuickGO ontologyBLASTP
643361643474114hypothetical proteinBLASTP
643578644030453SprT family metallopeptidaseQuickGO ontologyBLASTP
64435264442372tRNA-GluQuickGO ontologyBLASTP
64453864461376tRNA-LysQuickGO ontologyBLASTP
64462564470682tRNA-LeuQuickGO ontology
644999645178180hypothetical protein
6451316463721242major facilitator superfamily proteinQuickGO ontologyBLASTP
646438647184747oxidoreductaseQuickGO ontologyBLASTP
647431647706276phosphocarrier protein HPrQuickGO ontologyBLASTP
6478766490031128alphabeta hydrolase superfamily proteinQuickGO ontologyBLASTP
649228649773546TetR family transcriptional regulatorQuickGO ontologyBLASTP
649815650036222hypothetical proteinBLASTP
650068650208141hypothetical proteinBLASTP
6504276517131287amino acid permease family proteinQuickGO ontologyBLASTP
651867652310444LrpAsnC family transcriptional regulatorQuickGO ontologyBLASTP
653172653747576transcriptional regulator TetRQuickGO ontologyBLASTP
653807654556750short-chain dehydrogenasereductase family oxidoreductaseQuickGO ontologyBLASTP
6548156558281014oxidoreductase zinc-binding proteinQuickGO ontologyBLASTP
6566736576741002luciferase family proteinQuickGO ontologyBLASTP
657826658347522HTH-type transcriptional regulator LrpAQuickGO ontologyBLASTP
658697659461765hypothetical proteinBLASTP
6596546609641311tetracycline resistance proteinQuickGO ontologyBLASTP