Pre_GI Gene

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Host: NC_008800 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008800:4013298 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
40132984014116819undecaprenyl pyrophosphate phosphataseQuickGO ontologyBLASTP
40142784014637360bifunctional dihydroneopterin aldolasedihydroneopterin triphosphate 2-epimeraseQuickGO ontologyBLASTP
40147454015398654putative glycerol-3-phosphate acyltransferase PlsYQuickGO ontologyBLASTP
401555340165661014putative DNA-bindingiron metalloproteinAP endonucleaseQuickGO ontologyBLASTP
4016940401715521630S ribosomal protein S21QuickGO ontologyBLASTP
401729240190401749DNA primaseQuickGO ontologyBLASTP
401919840210361839RNA polymerase sigma factor RpoDQuickGO ontologyBLASTP
402146340227941332hypothetical proteinBLASTP
402284740239321086hypothetical proteinBLASTP
402395040258271878glycosyl hydrolase family proteinQuickGO ontologyBLASTP
40261554027015861transcriptional regulatorQuickGO ontologyBLASTP
40272434028151909N-acetylmuramic acid 6-phosphate etheraseQuickGO ontologyBLASTP
402815440296051452PTS system N-acetylmuramic acid transporter subunit IIBCQuickGO ontologyBLASTP
40296554030596942glutaminaseQuickGO ontologyBLASTP
403066640322221557putative amino acid permeaseQuickGO ontologyBLASTP
403229640336961401glutamate decarboxylaseQuickGO ontologyBLASTP
40340214034479459putative transcriptional regulatorQuickGO ontologyBLASTP
403458840358261239putative transporter proteinQuickGO ontologyBLASTP
40359184036490573acid-resistance membrane proteinQuickGO ontologyBLASTP