Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:2883716 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
288371628862652550plasma-membrane calcium-translocating P-type ATPaseQuickGO ontologyBLASTP
288671228883581647inorganic pyrophosphataseexopolyphosphataseQuickGO ontologyBLASTP
28884842889263780flagellar hook-basal body proteinQuickGO ontologyBLASTP
28892882890070783flagellar hook-basal body proteinQuickGO ontologyBLASTP
28900672890228162hypothetical protein
28902672890812546hypothetical proteinBLASTP
28908282891553726RNA polymerase sigma factor FliAWhiG familyQuickGO ontologyBLASTP
28915692892231663putative glycosyltransferaseQuickGO ontologyBLASTP
28922462893121876ATPase involved in chromosome partitioningQuickGO ontologyBLASTP
289311528943231209flagellar biosynthetic protein FlhFQuickGO ontologyBLASTP
289432328963922070flagellar biosynthesis protein FlhAQuickGO ontologyBLASTP
289640828982371830flagellar biosynthetic protein FlhBflagellar biosynthetic protein FliRQuickGO ontologyBLASTP
28982482898517270flagellar biosynthetic protein FliQQuickGO ontologyBLASTP
28985312899304774flagellar biosynthetic protein FliPQuickGO ontologyBLASTP
28994192899820402flagellar biogenesis proteinQuickGO ontologyBLASTP
29000032900506504flagellar basal body-associated proteinQuickGO ontologyBLASTP
29006262900820195uncharacterized protein possibly involved in motilityQuickGO ontologyBLASTP
290091829032062289flagellar hook-basal body proteinQuickGO ontologyBLASTP
29033042903693390flagellar operon proteinQuickGO ontologyBLASTP
29037022904220519flagellar hook capping proteinQuickGO ontologyBLASTP
290423429067862553flagellar hook-length control proteinQuickGO ontologyBLASTP
29067992907236438flagellar export protein FliJQuickGO ontologyBLASTP
290726029085671308flagellar protein export ATPase FliIQuickGO ontologyBLASTP