Pre_GI Gene

Some Help

Host: NC_015581 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015581:1791658 Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome

Host Lineage: Thioalkalimicrobium cyclicum; Thioalkalimicrobium; Piscirickettsiaceae; Thiotrichales; Proteobacteria; Bacteria

General Information: Isolation: Water; USA, California, Lake Mono. This organism is a sulfur-oxidizing bacterium isolated from highly alkaline soda lakes. These bacteria have a pH optimum of 10 and are able to oxidize sulfide, thiosulfate and tetrathionate.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
17916581792356699peptidase membrane zinc metallopeptidaseQuickGO ontologyBLASTP
17924211793278858RNA polymerase sigma 32 subunit RpoHQuickGO ontologyBLASTP
17933391793878540Calciumcalmodulin dependent protein kinase II association-domain-containing proteinQuickGO ontologyBLASTP
17939051794531627microcompartments proteinQuickGO ontologyBLASTP
17945541795270717Nucleoside-triphosphatase rdgBQuickGO ontologyBLASTP
17952751795823549Calciumcalmodulin dependent protein kinase II association-domain-containing proteinQuickGO ontologyBLASTP
17958831796881999LysR family transcriptional regulatorQuickGO ontologyBLASTP
17968981797218321hypothetical protein
17972381798218981hypothetical proteinBLASTP
179834617997041359sulfate transporterQuickGO ontologyBLASTP
17998801800125246hypothetical proteinBLASTP
18001221800664543Ferritin Dps family proteinQuickGO ontologyBLASTP
18007141801022309microcompartments proteinQuickGO ontologyBLASTP
18010981801397300microcompartments proteinQuickGO ontologyBLASTP
18015161801776261carboxysome peptide BQuickGO ontologyBLASTP
18017761802024249carboxysome peptide AQuickGO ontologyBLASTP
18020211802797777hypothetical protein
180280118049542154putative carboxysome structural peptide CsoS2QuickGO ontologyBLASTP
18049881805332345Ribulose-bisphosphate carboxylaseQuickGO ontologyBLASTP
180536818067801413Ribulose bisphosphate carboxylase large chainQuickGO ontologyBLASTP
18069631807334372Invasion gene expression up-regulator SirBQuickGO ontologyBLASTP
18073541808286933biotin biosynthesis protein BioCQuickGO ontologyBLASTP
18082791809073795carboxylesteraseQuickGO ontologyBLASTP
18092771809486210cold-shock DNA-binding domain-containing proteinQuickGO ontologyBLASTP
18095941810088495hypothetical proteinBLASTP
1810075181123211588-amino-7-oxononanoate synthaseQuickGO ontologyBLASTP
181125318123051053Biotin synthaseQuickGO ontologyBLASTP
18123161813002687phosphoribosyltransferaseQuickGO ontologyBLASTP
181305818141911134glycerate kinaseQuickGO ontologyBLASTP