Pre_GI Gene

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Host: NC_006177 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006177:3192500 Symbiobacterium thermophilum IAM 14863, complete genome

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
319255931945982040putative ATP-dependent DNA helicaseQuickGO ontologyBLASTP
31946033194896294hypothetical protein
31950053195283279hypothetical proteinBLASTP
31953633196265903flagellar motor protein MotBQuickGO ontologyBLASTP
31962703197067798flagellar motor protein MotAQuickGO ontologyBLASTP
31971573197984828flagellinQuickGO ontologyBLASTP
31982323198573342hypothetical protein
31985633198946384flagellar proteinQuickGO ontologyBLASTP
319898032004101431flagellar hook-associated proteinQuickGO ontologyBLASTP
32004223200763342flagellinQuickGO ontology
32007953201676882flagellar-hook associated proteinQuickGO ontologyBLASTP
320168732033631677flagellar hook-associated proteinQuickGO ontologyBLASTP
32033773203724348hypothetical protein glutamate-richQuickGO ontology
32037213204020300anti-sigma factor FlgMQuickGO ontology
32041513204894744hypothetical protein proline-richQuickGO ontology
32051973205958762RNA polymerase sigma factor related to flagellar biosynthesisQuickGO ontologyBLASTP
32059783206868891flagellar biosynthesis switch proteinQuickGO ontologyBLASTP
320687332083091437flagellar GTP-binding proteinQuickGO ontologyBLASTP
320831532103662052flagellar biosynthesis proteinQuickGO ontologyBLASTP
321039432114791086flagellar biosynthesis proteinQuickGO ontologyBLASTP