Pre_GI Gene

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Host: NC_003902 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003902:2211790 Xanthomonas campestris pv. campestris str. ATCC 33913, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from cabbage. Causes black rot disease in crucifers. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22117902212764975flagellar motor protein MotDQuickGO ontologyBLASTP
22127722213512741flagellar motor proteinQuickGO ontologyBLASTP
221443822174793042TonB-dependent receptorQuickGO ontologyBLASTP
22179942218530537hypothetical protein
22185272219330804hypothetical protein
22194772219854378hypothetical protein
22201012220517417hypothetical proteinBLASTP
22206042221233630hypothetical proteinBLASTP
222120622227171512hypothetical proteinBLASTP
222289222241061215IS1481 transposaseQuickGO ontologyBLASTP
22246192225236618hypothetical proteinBLASTP
22253172226039723hypothetical proteinBLASTP
222604522270461002hypothetical proteinBLASTP
222727722289321656chemotaxis related proteinQuickGO ontologyBLASTP
22289352229561627chemotaxis related proteinQuickGO ontologyBLASTP
22295612229941381chemotaxis proteinQuickGO ontologyBLASTP
22299772230744768RNA polymerase sigma factorQuickGO ontologyBLASTP
22307412231718978flagellar biosynthesis switch proteinQuickGO ontologyBLASTP
223161222332791668flagellar biosynthesis regulator FlhFQuickGO ontologyBLASTP