Pre_GI Gene

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Host: NC_006351 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006351:2398403 Burkholderia pseudomallei K96243 chromosome 2, complete sequence

Host Lineage: Burkholderia pseudomallei; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was a clinical isolate from Thailand. The genome of this organism carries many genomic islands as compared to the related organism B. mallei, suggesting extensive horizontal transfer. Opportunistic pathogen. This species is an opportunistic pathogen and can cause pneumonia, bacteremia, and melioidosis. It is normally found in terrestrial environments and has been recovered from rice paddies and moist tropical soil. It is endemic in Asia and Australia, but can be found in other parts of the world. The organism can exist intracellularly and can spread through the bloodstream (bacteremia).

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2398403239981814166-phosphogluconate dehydrogenaseQuickGO ontologyBLASTP
24002732400887615hypothetical proteinBLASTP
24009132401851939NAD-dependent deacetylaseQuickGO ontologyBLASTP
240184824032721425transport-related membrane proteinQuickGO ontologyBLASTP
24039092404769861hypothetical proteinBLASTP
240483324059991167hypothetical proteinBLASTP
2406685240676076tRNA-MetQuickGO ontologyBLASTP
240688424089262043RNA polymerase sigma factorQuickGO ontologyBLASTP
240937024112441875DNA primaseQuickGO ontologyBLASTP
24113382411784447hypothetical proteinBLASTP
2411951241216321330S ribosomal protein S21QuickGO ontologyBLASTP
241224324134661224hypothetical proteinBLASTP
241360624146461041O-sialoglycoprotein endopeptidaseQuickGO ontologyBLASTP
24150682415877810hypothetical proteinBLASTP
2416028241793219051-deoxy-D-xylulose-5-phosphate synthaseQuickGO ontologyBLASTP
24180162418900885geranyltranstransferaseQuickGO ontologyBLASTP
24188972419190294exodeoxyribonuclease VII small subunitQuickGO ontologyBLASTP