Pre_GI Gene

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Host: NC_008700 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008700:312099 Shewanella amazonensis SB2B, complete genome

Host Lineage: Shewanella amazonensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from shallow marine deposits (coastal shelf mud) of the Amazon River delta off of the coast of Brazil. Iron-reducing bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella amazonensis is capable of anaerobically reducing iron, manganese, and sulfur compounds and may be important to the cycling of these compounds in the environment.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3120993144502352conserved hypothetical proteinBLASTP
314648315343696conserved hypothetical proteinBLASTP
315340316263924transcriptional regulator LysR familyQuickGO ontologyBLASTP
316580317083504glyoxalasebleomycin resistance proteindioxygenaseQuickGO ontologyBLASTP
3187643216732910DNA-directed RNA polymerase sigma subunit sigma70sigma32-like proteinQuickGO ontologyBLASTP
3217363231871452conserved hypothetical proteinBLASTP
3232013260562856endonucleaseQuickGO ontologyBLASTP
3260373270531017conserved hypothetical proteinBLASTP
3270463288541809conserved hypothetical proteinBLASTP
3289843305461563modification methylase cytosine-specific methyltransferaseQuickGO ontologyBLASTP
330536331021486putative DNA mismatch endonuclease proteinQuickGO ontologyBLASTP
331047331655609conserved hypothetical protein
3319463333791434sodiumalanine symporterQuickGO ontologyBLASTP
333460334149690HAD-superfamily hydrolase subfamily IA variant 1 protein familyQuickGO ontologyBLASTP
3344063373362931TonB-dependent receptorQuickGO ontologyBLASTP
3373893417144326alpha-16-glucosidases pullulanase-typeQuickGO ontologyBLASTP