Pre_GI: BLASTP Hits

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Query: NC_002947:4994335:5032480 Pseudomonas putida KT2440, complete genome

Start: 5032480, End: 5032833, Length: 354

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010611:208268:231345231345231698354Acinetobacter baumannii ACICU, complete genomeputative translation initiation inhibitor, yjgF family3e-30130
NC_008700:3927896:394708839470883947441354Shewanella amazonensis SB2B, complete genomeconserved hypothetical translation initiation inhibitor, YjgF family7e-30129
NC_007948:4558000:457382245738224574193372Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP2e-27120
NC_007948:4646344:467261646726164672984369Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP1e-26118
NC_015724:339500:351931351931352311381Cupriavidus necator N-1 plasmid BB2p, complete sequenceendoribonuclease L-PSP4e-26116
NC_007948:4620661:464117646411764641538363Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP5e-26116
NC_011144:2674242:269121226912122691571360Phenylobacterium zucineum HLK1, complete genometranslation initiation inhibitor, yjgF family8e-26115
NC_007948:4646344:465957146595714659939369Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP3e-25113
NC_014924:1701952:172350917235091723853345Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeEndoribonuclease L-PSP3e-24110
NC_016147:1788219:179286217928621793203342Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeendoribonuclease l-psp protein2e-24110
NC_013282:2582720:260612826061282606472345Cronobacter turicensis, complete genomeUPF0076 protein yoaB1e-22105
NC_008752:620802:625054625054625431378Acidovorax avenae subsp. citrulli AAC00-1, complete genomeEndoribonuclease L-PSP6e-22102
NC_009085:1232890:125221212522121252520309Acinetobacter baumannii ATCC 17978, complete genomehypothetical protein1e-21101
NC_013416:1526920:153183815318381532191354Aggregatibacter actinomycetemcomitans D11S-1, complete genomeputative translation initiation inhibitor, YjgF family protein3e-21100
NC_016513:1859767:186698918669891867342354Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeputative translation initiation inhibitor5e-2199.8
NC_016027:2446806:244789724478972448247351Gluconacetobacter xylinus NBRC 3288, complete genometranslation initiation inhibitor2e-1890.9
NC_013209:2582878:261799526179952618345351Acetobacter pasteurianus IFO 3283-01, complete genometranslation initiation inhibitor YjgF4e-1890.1
NC_013757:1343396:135492513549251355287363Geodermatophilus obscurus DSM 43160, complete genomeEndoribonuclease L-PSP5e-1786.3
NC_006677:1255079:125996212599621260312351Gluconobacter oxydans 621H, complete genomehypothetical protein6e-1682.8
NC_016002:2825017:283421028342102834527318Pseudogulbenkiania sp. NH8B, complete genomeendoribonuclease L-PSP family protein6e-1682.8
NC_010125:955863:957436957436957786351Gluconacetobacter diazotrophicus PAl 5, complete genomeputative endoribonuclease6e-1682.8
NC_015136:2282488:232364623236462323990345Burkholderia sp. CCGE1001 chromosome 1, complete sequenceendoribonuclease L-PSP9e-1682
NC_010645:1341475:136041313604131360799387Bordetella avium 197N, complete genomeendoribonuclease2e-1374.3
NC_015733:2581324:260361526036152603959345Pseudomonas putida S16 chromosome, complete genomeendoribonuclease L-PSP family protein1e-1271.6
NC_017277:3083494:311081331108133111205393Synechocystis sp. PCC 6803, complete genomehypothetical protein8e-1269.3
NC_010465:660207:668352668352668732381Yersinia pseudotuberculosis YPIII, complete genomeendoribonuclease L-PSP9e-1268.9
NC_006155:4062000:407068240706824071062381Yersinia pseudotuberculosis IP 32953, complete genomeputative translational inhibitor protein9e-1268.9
NC_010159:1071937:107785110778511078231381Yersinia pestis Angola, complete genomeputative endoribonuclease L-PSP9e-1268.9
NC_008150:3495851:350498335049833505363381Yersinia pestis Antiqua, complete genomeputative translational inhibitor protein9e-1268.9
NC_003143:675622:688077688077688457381Yersinia pestis CO92, complete genomeputative translational inhibitor protein9e-1268.9
NC_010634:4001154:401088840108884011268381Yersinia pseudotuberculosis PB1/+, complete genomeendoribonuclease L-PSP9e-1268.9
NC_004088:3923804:393208239320823932462381Yersinia pestis KIM, complete genomehypothetical protein9e-1268.9
NC_005810:3272765:328090632809063281286381Yersinia pestis biovar Microtus str. 91001, complete genomeputative translational inhibitor protein9e-1268.9
NC_008149:587689:599607599607599987381Yersinia pestis Nepal516, complete genometranslational inhibitor protein9e-1268.9
NC_009708:633054:641199641199641579381Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeendoribonuclease L-PSP8e-1268.9
NC_019978:1022209:102664010266401027026387Halobacteroides halobius DSM 5150, complete genomeendoribonuclease L-PSP, putative8e-1268.9
NC_017265:3790750:379744437974443797824381Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative translational inhibitor protein9e-1268.9
NC_017160:676249:685923685923686303381Yersinia pestis D182038 chromosome, complete genomeputative translational inhibitor protein9e-1268.9
NC_017154:671816:683738683738684118381Yersinia pestis D106004 chromosome, complete genomeputative translational inhibitor protein9e-1268.9
NC_014029:729675:741586741586741966381Yersinia pestis Z176003 chromosome, complete genomeputative translational inhibitor protein9e-1268.9
NC_009381:460358:470044470044470424381Yersinia pestis Pestoides F chromosome, complete genometranslational inhibitor protein9e-1268.9
NC_009481:676478:688498688498688896399Synechococcus sp. WH 7803 chromosome, complete genomeputative translation initiation inhibitor3e-1167.4
NC_014632:11925:310333103331416384Ilyobacter polytropus DSM 2926 chromosome, complete genomeendoribonuclease L-PSP8e-1165.9
NC_014632:113420:126595126595126978384Ilyobacter polytropus DSM 2926 chromosome, complete genomeendoribonuclease L-PSP1e-1065.1
NC_015144:1526669:153075515307551531147393Weeksella virosa DSM 16922 chromosome, complete genomeendoribonuclease L-PSP2e-1064.7
NC_012121:139741:149032149032149412381Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative purine regulatory protein2e-1064.7
NC_005070:1486496:148833414883341488741408Synechococcus sp. WH 8102, complete genomeputative translation initiation inhibitor2e-1064.3
NC_010674:615963:630362630362630736375Clostridium botulinum B str. Eklund 17B, complete genomeputative endoribonuclease L-PSP2e-1064.3
NC_010723:575254:594070594070594447378Clostridium botulinum E3 str. Alaska E43, complete genomeputative endoribonuclease L-PSP3e-1063.5
NC_008698:560529:563553563553563933381Thermofilum pendens Hrk 5, complete genomeputative endoribonuclease L-PSP4e-1063.2
NC_008319:1727686:173335017333501733754405Synechococcus sp. CC9311, complete genomeputative endoribonuclease L-PSP9e-1062.4
NC_011126:129937:135039135039135419381Hydrogenobaculum sp. Y04AAS1, complete genomeendoribonuclease L-PSP1e-0961.6
NC_015224:2061951:206342220634222063808387Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-0961.6
NC_014328:4387303:438918143891814389555375Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative endoribonuclease L-PSP1e-0961.6
NC_006270:2657726:266978326697832670157375Bacillus licheniformis ATCC 14580, complete genomeputative Endoribonuclease L-PSP2e-0961.2
NC_016791:1980844:200449120044912004871381Clostridium sp. BNL1100 chromosome, complete genomeendoribonuclease L-PSP2e-0960.8
NC_006322:2658587:267064426706442671027384Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-0960.8
NC_014364:2904443:290909329090932909467375Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeendoribonuclease L-PSP3e-0960.5
NC_008800:2127918:212791821279182128307390Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein3e-0960.5
NC_009342:841500:851477851477851887411Corynebacterium glutamicum R chromosome, complete genomehypothetical protein4e-0960.1
NC_012658:2138791:214621421462142146582369Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative endoribonuclease L-PSP5e-0959.7
NC_016642:1234500:123607312360731236456384Pseudovibrio sp. FO-BEG1 chromosome, complete genomezinc carboxypeptidase-like protein7e-0959.3
NC_013744:159861:178667178667179047381Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeendoribonuclease L-PSP1e-0858.9
NC_009699:2142177:215012221501222150490369Clostridium botulinum F str. Langeland chromosome, complete genomeendoribonuclease L-PSP1e-0858.5
NC_017297:2143000:215022121502212150589369Clostridium botulinum F str. 230613 chromosome, complete genomeendoribonuclease L-PSP1e-0858.5
NC_007335:1820332:183710018371001837507408Prochlorococcus marinus str. NATL2A, complete genomeYjgF-like protein1e-0858.5
NC_020411:114683:138539138539138919381Hydrogenobaculum sp. HO, complete genomeendoribonuclease L-PSP1e-0858.5
NC_015587:114684:138540138540138920381Hydrogenobaculum sp. SHO chromosome, complete genomeendoribonuclease L-PSP1e-0858.5
NC_015557:114648:138504138504138884381Hydrogenobaculum sp. 3684 chromosome, complete genomeendoribonuclease L-PSP1e-0858.5
NC_008819:541000:556964556964557371408Prochlorococcus marinus str. NATL1A, complete genomePutative translation initiation inhibitor, yjgF family1e-0858.5
NC_021182:401129:416427416427416807381Clostridium pasteurianum BC1, complete genomeendoribonuclease L-PSP, putative2e-0858.2
NC_015873:380485:409686409686410054369Megasphaera elsdenii DSM 20460, complete genomeputative endoribonuclease L-PSP2e-0858.2
NC_016047:2631511:264086726408672641241375Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetranslation initiation inhibitor2e-0858.2
NC_014221:398636:411607411607411999393Truepera radiovictrix DSM 17093 chromosome, complete genomeendoribonuclease L-PSP1e-0858.2
NC_008817:539349:556560556560556952393Prochlorococcus marinus str. MIT 9515, complete genomePutative translation initiation inhibitor, yjgF family2e-0857.8
NC_015500:2417041:243375424337542434122369Treponema brennaborense DSM 12168 chromosome, complete genomeendoribonuclease L-PSP2e-0857.8
NC_007577:503440:520657520657521049393Prochlorococcus marinus str. MIT 9312, complete genomeYjgF-like protein2e-0857.8
NC_008816:518895:536095536095536487393Prochlorococcus marinus str. AS9601, complete genomePutative translation initiation inhibitor, yjgF family2e-0857.8
NC_007907:4926548:495091549509154951295381Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0857.8
NC_016025:807226:829399829399829797399Candidatus Chloracidobacterium thermophilum B chromosome chromosomeendoribonuclease L-PSP3e-0857.4
NC_010645:1341475:136079613607961361197402Bordetella avium 197N, complete genomeendoribonuclease2e-0857.4
NC_009091:493302:510528510528510920393Prochlorococcus marinus str. MIT 9301, complete genomePutative translation initiation inhibitor, yjgF family2e-0857.4
NC_015276:1531159:153304715330471533430384Marinomonas mediterranea MMB-1 chromosome, complete genomepyrimidine utilization protein C3e-0857
NC_010556:316996:321607321607321996390Exiguobacterium sibiricum 255-15, complete genomeendoribonuclease L-PSP3e-0857
NC_013202:771161:807690807690808067378Halomicrobium mukohataei DSM 12286, complete genomeendoribonuclease L-PSP4e-0857
NC_009495:2085000:209178220917822092150369Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeendoribonuclease L-PSP5e-0856.6
NC_009697:2012500:202042320204232020791369Clostridium botulinum A str. ATCC 19397 chromosome, completeendoribonuclease L-PSP5e-0856.6
NC_009698:2012500:202064020206402021008369Clostridium botulinum A str. Hall chromosome, complete genomeendoribonuclease L-PSP5e-0856.6
NC_010516:2093901:209988820998882100256369Clostridium botulinum B1 str. Okra, complete genomeputative endoribonuclease L-PSP5e-0856.6
NC_012563:2230403:223849122384912238859369Clostridium botulinum A2 str. Kyoto, complete genomeputative endoribonuclease L-PSP4e-0856.6
NC_013922:2110894:211089421108942111277384Natrialba magadii ATCC 43099 chromosome, complete genomeEndoribonuclease L-PSP6e-0856.2
NC_016885:809000:814549814549814929381Pyrobaculum oguniense TE7 chromosome, complete genomeendoribonuclease L-PSP6e-0856.2
NC_015873:1411718:141171814117181412104387Megasphaera elsdenii DSM 20460, complete genomeputative endoribonuclease L-PSP7e-0855.8
NC_014618:586240:610365610365610754390Enterobacter cloacae SCF1 chromosome, complete genomeendoribonuclease L-PSP7e-0855.8
NC_005072:508827:526041526041526433393Prochlorococcus marinus subsp. pastoris str. CCMP1986, completehypothetical protein9e-0855.5
NC_017361:930280:930280930280930657378Helicobacter pylori SouthAfrica7 chromosome, complete genometranslation initiation inhibitor1e-0755.5
NC_009614:3714770:372855137285513728928378Bacteroides vulgatus ATCC 8482 chromosome, complete genomeendoribonuclease L-PSP1e-0755.1
NC_005810:1976000:199639219963921996799408Yersinia pestis biovar Microtus str. 91001, complete genomeYjgF-family lipoprotein1e-0755.1
NC_016935:3103430:311051431105143110906393Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein1e-0755.1
NC_003143:1880000:190011019001101900487378Yersinia pestis CO92, complete genomeYjgF-family lipoprotein2e-0754.7
NC_014029:2607666:260766626076662608043378Yersinia pestis Z176003 chromosome, complete genomeYjgF-family lipoprotein2e-0754.7
NC_017265:1715035:173654617365461736923378Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,YjgF-family lipoprotein2e-0754.7
NC_009840:544816:562030562030562422393Prochlorococcus marinus str. MIT 9215, complete genomePutative translation initiation inhibitor, yjgF family2e-0754.7
NC_015589:7678:182061820618589384Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeendoribonuclease L-PSP2e-0754.7
NC_020272:3396800:342115334211533421530378Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein2e-0754.7
NC_012489:1874415:187402618740261874418393Gemmatimonas aurantiaca T-27, complete genomeputative endoribonuclease2e-0754.3
NC_011297:1167615:117385711738571174234378Dictyoglomus thermophilum H-6-12, complete genomeendoribonuclease L-PSP2e-0754.3
NC_012669:96966:100822100822101265444Beutenbergia cavernae DSM 12333, complete genomeEndoribonuclease L-PSP3e-0753.9
NC_017079:700524:701704701704702087384Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomehypothetical protein3e-0753.9
NC_015666:1293500:129843212984321298812381Halopiger xanaduensis SH-6 chromosome, complete genomeendoribonuclease L-PSP4e-0753.5
NC_019974:3013338:302391930239193024308390Natronococcus occultus SP4, complete genomeendoribonuclease L-PSP, putative4e-0753.5
NC_014836:2919508:383238324212381Desulfurispirillum indicum S5 chromosome, complete genomeendoribonuclease L-PSP5e-0753.1
NC_005042:513931:532072532072532470399Prochlorococcus marinus subsp. marinus str. CCMP1375, completePutative translation initiation inhibitor6e-0752.8
NC_015690:2553837:256098725609872561379393Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein6e-0752.8
NC_007613:4217557:425144742514474251872426Shigella boydii Sb227, complete genomehypothetical protein9e-0752.4
NC_010658:4494103:450877145087714509157387Shigella boydii CDC 3083-94, complete genomeputative endoribonuclease L-PSP9e-0752.4
NC_010498:4821519:482574748257474826172426Escherichia coli SMS-3-5, complete genomeputative endoribonuclease L-PSP9e-0752.4
AC_000091:4472000:447520744752074475593387Escherichia coli W3110 DNA, complete genomeketoacid-binding protein9e-0752.4
NC_010473:4564590:457035845703584570744387Escherichia coli str. K-12 substr. DH10B, complete genomeketoacid-binding protein9e-0752.4
NC_000913:4462782:446855044685504468936387Escherichia coli K12, complete genomeketoacid-binding protein9e-0752.4
NC_011742:4795733:479996147999614800347387Escherichia coli S88 chromosome, complete genomeketoacid-binding protein9e-0752.4
NC_012947:3947238:395991839599183960304387Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeendoribonuclease L-PSP9e-0752.4
NC_012967:4449576:445380444538044454190387Escherichia coli B str. REL606 chromosome, complete genomeketoacid-binding protein9e-0752.4
NC_009800:3307123:330855933085593308948390Escherichia coli HS, complete genomeputative endoribonuclease L-PSP1e-0652
AC_000091:3258377:325837732583773258766390Escherichia coli W3110 DNA, complete genomepredicted L-PSP (mRNA) endoribonuclease1e-0652
NC_000913:3256307:325774332577433258132390Escherichia coli K12, complete genomepredicted L-PSP (mRNA) endoribonuclease1e-0652
NC_010468:613812:630450630450630839390Escherichia coli ATCC 8739, complete genomeendoribonuclease L-PSP1e-0652
NC_010473:3354052:335548833554883355877390Escherichia coli str. K-12 substr. DH10B, complete genomepredicted L-PSP (mRNA) endoribonuclease1e-0652
NC_010658:3014371:302702430270243027413390Shigella boydii CDC 3083-94, complete genomeputative endoribonuclease L-PSP1e-0652
NC_011748:3608917:361329736132973613686390Escherichia coli 55989, complete genomehypothetical protein1e-0652
NC_011750:3768692:377307237730723773461390Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-0652
CU928160:3344746:334618233461823346571390Escherichia coli IAI1 chromosome, complete genomeL-PSP (mRNA) endoribonuclease1e-0652
NC_004337:3249791:325122732512273251616390Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-0652
CP002516:613462:628259628259628648390Escherichia coli KO11, complete genomeendoribonuclease L-PSP1e-0652
CP002185:3475991:347742534774253477814390Escherichia coli W, complete genomepredicted L-PSP (mRNA) endoribonuclease1e-0652
CU928145:3608917:361329736132973613686390Escherichia coli 55989 chromosome, complete genomeL-PSP (mRNA) endoribonuclease1e-0652
NC_010498:3488513:348994934899493490338390Escherichia coli SMS-3-5, complete genomeputative endoribonuclease L-PSP1e-0652
NC_002695:3994970:399935039993503999739390Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-0652
NC_013941:3884725:388910538891053889557453Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTdcF protein1e-0652
NC_017328:3289853:329128932912893291741453Shigella flexneri 2002017 chromosome, complete genomehypothetical protein1e-0652
NC_007613:2981829:298182929818292982281453Shigella boydii Sb227, complete genomehypothetical protein1e-0652
NC_008258:3224721:322615732261573226609453Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-0652
NC_013385:90331:993919939199813423Ammonifex degensii KC4, complete genomeendoribonuclease L-PSP1e-0652
NC_011751:3710786:371516737151673715556390Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-0652
NC_016902:613462:628259628259628648390Escherichia coli KO11FL chromosome, complete genomeendoribonuclease L-PSP1e-0652
NC_012967:3191319:319275531927553193144390Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein1e-0652
NC_012947:630757:647395647395647784390Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-0652
NC_012759:3143455:314489131448913145280390Escherichia coli BW2952 chromosome, complete genomehypothetical protein1e-0652
NC_011741:3344746:334618233461823346571390Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-0652
NC_011415:3523364:352774435277443528133390Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-0652
NC_004741:3240909:324234532423453242734390Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-0652
NC_020211:379000:394618394618395007390Serratia marcescens WW4, complete genomeendoribonuclease L-PSP2e-0651.6
CP002207:1538782:155739615573961557770375Bacillus atrophaeus 1942, complete genomeendoribonuclease L-PSP1e-0651.6
NC_014639:1538782:155739615573961557770375Bacillus atrophaeus 1942 chromosome, complete genomeendoribonuclease L-PSP1e-0651.6
NC_006087:28490:633956339563799405Leifsonia xyli subsp. xyli str. CTCB07, complete genomeprotein synthesis inhibitor2e-0651.2
NC_011661:1332309:135425513542551354632378Dictyoglomus turgidum DSM 6724, complete genomeendoribonuclease L-PSP2e-0651.2
NC_009802:1827138:184306818430681843502435Campylobacter concisus 13826, complete genomeputative endoribonuclease L-PSP2e-0651.2
NC_013766:906550:918309918309918686378Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein3e-0650.4
NC_003210:870587:882328882328882705378Listeria monocytogenes EGD-e, complete genomehypothetical protein3e-0650.4
NC_020063:4170464:418221241822124182598387Enterobacteriaceae bacterium strain FGI 57, complete genomeendoribonuclease L-PSP, putative3e-0650.4
NC_006351:2759708:279335527933552793765411Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein5e-0650.1