Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:3488513 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
348851334898831371L-serine ammonia-lyase TdcGQuickGO ontologyBLASTP
34899493490338390putative endoribonuclease L-PSPQuickGO ontologyBLASTP
349035234926462295formate acetyltransferaseQuickGO ontologyBLASTP
349268034938881209propionate kinaseQuickGO ontologyBLASTP
349391434952451332threonineserine transporterQuickGO ontologyBLASTP
34952673496256990threonine dehydratase catabolicQuickGO ontologyBLASTP
34963553497293939transcriptional regulator TdcAQuickGO ontologyBLASTP
34974823497826345threonine dehydratase operon activator proteinQuickGO ontologyBLASTP
34979083498045138hypothetical proteinBLASTP
34980823498621540hypothetical proteinBLASTP
349864334998301188hypothetical proteinBLASTP
350046135016061146glycerate kinaseQuickGO ontologyBLASTP
350170335025878852-hydroxy-3-oxopropionate reductaseQuickGO ontologyBLASTP
350262335033937712-dehydro-3-deoxyglucarate aldolaseQuickGO ontologyBLASTP
350340935047431335galactarate permease GarPQuickGO ontologyBLASTP
35047643504889126hypothetical protein
35049523505071120hypothetical proteinBLASTP
350511835066891572galactarate dehydrataseQuickGO ontologyBLASTP
35070333507173141HtrA suppressor protein SohAQuickGO ontologyBLASTP
35071733507637465hypothetical proteinBLASTP
35076923508501810DeoR family transcriptional regulatorQuickGO ontologyBLASTP