Pre_GI Gene

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Host: NC_011748 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011748:3608917 Escherichia coli 55989, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
360891736102271311hypothetical proteinBLASTP
361025536115231269putative transporterQuickGO ontologyBLASTP
361186136132251365L-serine dehydratase 3QuickGO ontologyBLASTP
36132973613686390hypothetical proteinBLASTP
361370036159942295pyruvate formate-lyase 42-ketobutyrate formate-lyaseQuickGO ontologyBLASTP
361602836172481221propionateacetate kinaseQuickGO ontologyBLASTP
361726236185931332threonineserine transporter TdcCQuickGO ontologyBLASTP
36186153619604990threonine dehydrataseQuickGO ontologyBLASTP
36197033620641939DNA-binding transcriptional activator TdcAQuickGO ontologyBLASTP
36208183621174357DNA-binding transcriptional activator TdcRQuickGO ontologyBLASTP
36214303621969540hypothetical proteinBLASTP
362199136231781188hypothetical proteinBLASTP
36235163624496981transposase IS110 familyQuickGO ontologyBLASTP
36251843625560377M1 RNAQuickGO ontologyBLASTP
362559336268191227glycerate kinase IQuickGO ontologyBLASTP
36268353627725891tartronate semialdehyde reductaseQuickGO ontologyBLASTP
36277553628525771alpha-dehydro-beta-deoxy-D-glucarate aldolaseQuickGO ontologyBLASTP
362854136298751335putative D-galactarate transporterQuickGO ontologyBLASTP
363024936318201572D-galactarate dehydrogenaseQuickGO ontologyBLASTP
36319693632304336putative regulator PrlFQuickGO ontologyBLASTP
36323043632768465hypothetical proteinBLASTP