Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:3884725 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
388472538860351311hypothetical proteinBLASTP
388606338873941332transporter permeaseQuickGO ontologyBLASTP
388766938890391371L-serine ammonia-lyase TdcGQuickGO ontologyBLASTP
38891053889557453TdcF proteinQuickGO ontologyBLASTP
388950838918022295Keto-acid formate acetyltransferaseQuickGO ontologyBLASTP
389183638930561221kinaseQuickGO ontologyBLASTP
389307038944011332Threonineserine transporter tdcC Hthreonine-serine symporterQuickGO ontologyBLASTP
38944233895412990Threonine dehydratase catabolicQuickGO ontologyBLASTP
38955113896449939DNA-binding transcriptional activatorQuickGO ontologyBLASTP
38966383896982345Threonine dehydratase operon activator proteinQuickGO ontologyBLASTP
38972173897777561hypothetical proteinBLASTP
389779938989861188hypothetical proteinBLASTP
38990473899574528hypothetical proteinBLASTP
389950239007281227hypothetical proteinBLASTP
390074439016348912-hydroxy-3-oxopropionate reductaseQuickGO ontologyBLASTP
390166439024347712-dehydro-3-deoxyglucarate aldolaseQuickGO ontologyBLASTP
390245039037841335galactarate transporterQuickGO ontologyBLASTP
390415939057301572galactarate dehydrataseQuickGO ontologyBLASTP
39058793906214336HtrA suppressor proteinQuickGO ontologyBLASTP
39062143906678465hypothetical proteinBLASTP
39067333907542810aga operon transcriptional repressorQuickGO ontologyBLASTP
390779139090711281D-tagatose-bisphosphate aldolase class II non-catalytic subunitQuickGO ontologyBLASTP
39090583909567510PTS system subunit IIBQuickGO ontologyBLASTP