Pre_GI Gene

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Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:630757 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6307576323281572galactarate dehydrataseQuickGO ontologyBLASTP
6327036340371335d-galactonate transporterQuickGO ontologyBLASTP
634053634823771alpha-dehydro-beta-deoxy-D-glucarate aldolaseQuickGO ontologyBLASTP
634853635743891tartronate semialdehyde reductaseQuickGO ontologyBLASTP
6358406369851146glycerate kinase IQuickGO ontologyBLASTP
6379876390901104hypothetical proteinBLASTP
639112639651540hypothetical proteinBLASTP
639907640263357DNA-binding transcriptional activator TdcRQuickGO ontologyBLASTP
640440641378939DNA-binding transcriptional activator TdcAQuickGO ontologyBLASTP
641477642466990threonine dehydrataseQuickGO ontologyBLASTP
6424886438191332threonineserine transporter TdcCQuickGO ontologyBLASTP
6438456450531209propionateacetate kinaseQuickGO ontologyBLASTP
6450876473812295formate acetyltransferaseQuickGO ontologyBLASTP
647395647784390hypothetical proteinBLASTP
6478566492201365L-serine dehydrataseQuickGO ontologyBLASTP
6494966508271332serine transporterQuickGO ontologyBLASTP
6508556521651311hypothetical proteinBLASTP
652299652463165hypothetical protein
652486653187702pirinQuickGO ontologyBLASTP