Pre_GI Gene

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Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:3947238 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
394723839500932856valyl-tRNA synthetaseQuickGO ontologyBLASTP
395014939513451197hypothetical proteinBLASTP
39515383952041504GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
39520873952503417hypothetical proteinBLASTP
395266539536691005ornithine carbamoyltransferase subunit IQuickGO ontologyBLASTP
395374239553941653hypothetical proteinBLASTP
39555173955969453hypothetical proteinBLASTP
39561143956707594TetR family transcriptional regulatorQuickGO ontologyBLASTP
39567783957491714oxidoreductaseQuickGO ontologyBLASTP
39576223958017396endoribonuclease L-PSPQuickGO ontologyBLASTP
39584363959371936aspartate carbamoyltransferase catalytic subunitQuickGO ontologyBLASTP
39593843959845462aspartate carbamoyltransferase regulatory subunitQuickGO ontologyBLASTP
39599183960304387endoribonuclease L-PSPQuickGO ontologyBLASTP
396051039632062697magnesium-transporting ATPase MgtAQuickGO ontologyBLASTP
39635853964532948trehalose repressorQuickGO ontologyBLASTP
396465139660721422PTS system trehalosemaltose-specific transporter subunits IIBCQuickGO ontologyBLASTP