Pre_GI Gene

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Host: NC_007948 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007948:4620661 Polaromonas sp. JS666, complete genome

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
46197514620668918binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
462066146217281068ABC transporter relatedQuickGO ontologyBLASTP
462182146228641044extracellular solute-binding protein family 1QuickGO ontologyBLASTP
46230684623979912transcriptional regulator LysR familyQuickGO ontologyBLASTP
462465446257211068putative porin precursor transmembrane proteinQuickGO ontologyBLASTP
46260934626818726Aspartate racemaseQuickGO ontologyBLASTP
46268544627825972Uncharacterized protein UPF0065QuickGO ontologyBLASTP
462785546293541500argininosuccinate lyaseQuickGO ontologyBLASTP
46294834630361879transcriptional regulator LysR familyQuickGO ontologyBLASTP
463057046316881119Extracellular ligand-binding receptorQuickGO ontologyBLASTP
46317374632702966Uncharacterized protein UPF0065QuickGO ontologyBLASTP
463280846346671860Oligopeptidedipeptide ABC transporter ATP-binding protein-likeQuickGO ontologyBLASTP
463466446362051542argininosuccinate lyaseQuickGO ontologyBLASTP
463621446377791566extracellular solute-binding protein family 5QuickGO ontologyBLASTP
46378724638795924binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
46387924639781990binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
46399314640836906transcriptional regulator LysR familyQuickGO ontologyBLASTP
46411764641538363Endoribonuclease L-PSPQuickGO ontologyBLASTP
464153546429561422BFD-like 2Fe-2S-binding regionQuickGO ontologyBLASTP
46429534643252300putative sarcosine oxidase alpha subunitQuickGO ontologyBLASTP