Pre_GI Gene

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Host: NC_011742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:4795733 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
47957334796680948trehalose repressorQuickGO ontologyBLASTP
479705947997552697magnesium-transporting ATPase MgtAQuickGO ontologyBLASTP
47999614800347387ketoacid-binding proteinQuickGO ontologyBLASTP
48004204800881462aspartate carbamoyltransferase regulatory subunitQuickGO ontologyBLASTP
48008944801829936aspartate carbamoyltransferase catalytic subunitQuickGO ontologyBLASTP
48018334801967135pyrBI operon leader peptideQuickGO ontologyBLASTP
48022484802643396mRNA endoribonucleaseQuickGO ontologyBLASTP
48027744803487714oxidoreductaseQuickGO ontologyBLASTP
48035584804151594transcriptional regulatorQuickGO ontologyBLASTP
48042964804748453hypothetical proteinBLASTP
480487148064541584hypothetical proteinBLASTP
480662748076311005ornithine carbamoyltransferase subunit IQuickGO ontologyBLASTP
48077934808209417hypothetical proteinBLASTP
48082554808758504acetyltransferaseQuickGO ontologyBLASTP
480895148101471197hypothetical proteinBLASTP
481020148130562856valyl-tRNA synthetaseQuickGO ontologyBLASTP
48130564813499444DNA polymerase III subunit chiQuickGO ontologyBLASTP
481385348153641512leucyl aminopeptidaseQuickGO ontologyBLASTP
481563148167311101hypothetical proteinBLASTP
481673148178131083hypothetical proteinBLASTP
481793248194341503ATPaseQuickGO ontologyBLASTP