Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:4821519 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
48215194822466948trehalose operon repressorQuickGO ontologyBLASTP
482284548255412697magnesium-translocating P-type ATPaseQuickGO ontologyBLASTP
48257474826172426putative endoribonuclease L-PSPQuickGO ontologyBLASTP
48262064826667462aspartate carbamoyltransferase regulatory subunitQuickGO ontologyBLASTP
48266804827615936aspartate carbamoyltransferase catalytic subunitQuickGO ontologyBLASTP
48277864827929144hypothetical protein
48280344828429396endoribonuclease L-PSP family proteinQuickGO ontologyBLASTP
48285614829274714short chain dehydrogenasereductase family oxidoreductaseQuickGO ontologyBLASTP
48293454829938594TetR family transcriptional regulatorQuickGO ontologyBLASTP
48299384830066129hypothetical protein
48300834830535453hypothetical proteinBLASTP
483238348333871005ornithine carbamoyltransferaseQuickGO ontologyBLASTP
48335494833965417hypothetical proteinBLASTP
48340114834514504acetyltransferaseQuickGO ontologyBLASTP
483468048359031224hypothetical proteinBLASTP
483595748388122856valyl-tRNA synthetaseQuickGO ontologyBLASTP
48388124839294483DNA polymerase III chi subunitQuickGO ontologyBLASTP
483938948409001512leucyl aminopeptidaseQuickGO ontologyBLASTP
48411254841253129hypothetical protein
484116748422671101putative permeaseQuickGO ontologyBLASTP
484226748433491083putative permeaseQuickGO ontologyBLASTP
484346848449701503hypothetical proteinBLASTP