Pre_GI Gene

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Host: NC_012967 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012967:4449576 Escherichia coli B str. REL606 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
44495764450523948trehalose repressorQuickGO ontologyBLASTP
445090244535982697magnesium-transporting ATPase MgtAQuickGO ontologyBLASTP
44538044454190387ketoacid-binding proteinQuickGO ontologyBLASTP
44542634454724462aspartate carbamoyltransferase regulatory subunitQuickGO ontologyBLASTP
44547374455672936aspartate carbamoyltransferase catalytic subunitQuickGO ontologyBLASTP
44556764455810135pyrBI operon leader peptideQuickGO ontologyBLASTP
44560914456486396putative mRNA endoribonucleaseQuickGO ontologyBLASTP
44566174457330714oxidoreductaseQuickGO ontologyBLASTP
44574014457994594putative transcriptional regulatorQuickGO ontologyBLASTP
44581394458591453hypothetical proteinBLASTP
445871444603661653hypothetical proteinBLASTP
446043944614431005ornithine carbamoyltransferase subunit IQuickGO ontologyBLASTP
44616054462021417hypothetical proteinBLASTP
44620674462570504putative acetyltransferaseQuickGO ontologyBLASTP
446276344639591197inner membrane proteinQuickGO ontologyBLASTP
446401544668702856valyl-tRNA synthetaseQuickGO ontologyBLASTP
44668704467313444DNA polymerase III subunit chiQuickGO ontologyBLASTP
446766744691781512leucyl aminopeptidaseQuickGO ontologyBLASTP
446944544705451101inner membrane proteinQuickGO ontologyBLASTP
447054544716271083inner membrane proteinQuickGO ontologyBLASTP
447178844732901503putative ATPaseQuickGO ontologyBLASTP