Pre_GI: BLASTP Hits

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Query: NC_009512:1518113:1543461 Pseudomonas putida F1, complete genome

Start: 1543461, End: 1543673, Length: 213

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4931104:495697049569704957278309Pseudomonas putida ND6 chromosome, complete genomeputative transposase6e-31132
NC_017986:4790482:483093748309374831245309Pseudomonas putida ND6 chromosome, complete genomeputative transposase6e-31132
NC_002947:4994335:501418850141885014496309Pseudomonas putida KT2440, complete genometransposase, OrfA1e-30131
NC_009656:6224221:623073762307376231045309Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein9e-27118
NC_009434:2006500:201519820151982015506309Pseudomonas stutzeri A1501, complete genometransposase9e-27118
NC_005773:3220500:323854532385453238853309Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy24, transposase orfA1e-25115
NC_005773:4282840:429006642900664290374309Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy24, transposase orfA1e-25115
NC_005773:4028500:404085240408524041160309Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy24, transposase orfA1e-25115
NC_015733:2658337:268290826829082683216309Pseudomonas putida S16 chromosome, complete genomeputative transposase1e-24111
NC_002516:1031386:106206110620611062369309Pseudomonas aeruginosa PAO1, complete genomehypothetical protein8e-23105
NC_009656:2512733:253924225392422539550309Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-22104
NC_009656:2422083:242924624292462429554309Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-22104
NC_008463:4566976:458784145878414588149309Pseudomonas aeruginosa UCBPP-PA14, complete genomepossible transposase2e-22104
NC_008463:282565:298567298567298875309Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-22104
NC_008061:2193000:219570321957032196011309Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetransposase IS3/IS9116e-22102
NC_010515:1428664:144444514444451444753309Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein6e-22102
NC_008543:61000:737627376274070309Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetransposase IS3/IS911 family protein6e-22102
NC_018080:1834754:184939318493931849701309Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-21101
NC_018080:2288700:229778022977802298088309Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-21101
NC_018080:2288700:230736523073652307673309Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-21101
NC_018080:4280401:429320242932024293510309Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-21101
NC_018080:5070687:508200050820005082308309Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-21101
NC_002516:2113186:211858521185852118893309Pseudomonas aeruginosa PAO1, complete genomehypothetical protein5e-2199.4
NC_003295:2507850:251507625150762515384309Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSPOSASE PROTEIN3e-2097.1
NC_010515:1205258:120981712098171210125309Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein3e-2097.1
NC_020209:5077410:509344250934425093750309Pseudomonas poae RE*1-1-14, complete genomeISPsy24, transposase orfA6e-2096.3
NC_014311:1635408:164167716416771642009333Ralstonia solanacearum PSI07 chromosome, complete genometransposase, insN transposase9e-2095.5
NC_017506:93494:130373130373130678306Marinobacter adhaerens HP15 chromosome, complete genometransposase, OrfA9e-1992
NC_016614:1543333:155484115548411555152312Vibrio sp. EJY3 chromosome 2, complete sequencetransposase IS3/IS911 family protein4e-1890.1
NC_012721:770651:798647798647798985339Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase5e-1889.7
NC_009654:1729159:173458817345881734893306Marinomonas sp. MWYL1, complete genometransposase IS3/IS911 family protein5e-1889.7
NC_015556:4543380:455624845562484556685438Pseudomonas fulva 12-X chromosome, complete genome6e-1682.8
NC_009783:1665610:168667616866761686987312Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein8e-1682.4
NC_005773:1675793:168629816862981686444147Pseudomonas syringae pv. phaseolicola 1448A, complete genometransposase, truncated3e-1580.5
NC_008260:228475:244612244612244830219Alcanivorax borkumensis SK2, complete genometransposase, putative4e-1476.6
NC_004459:349500:367974367974368270297Vibrio vulnificus CMCP6 chromosome I, complete sequencePutative transposase6e-1372.8
NC_014618:1452927:146163514616351461937303Enterobacter cloacae SCF1 chromosome, complete genometransposase IS3/IS911 family protein3e-1167.4
CU928145:2973968:299168929916892992036348Escherichia coli 55989 chromosome, complete genometransposase ORF A, IS3 family6e-1166.2
NC_011748:2973968:299168929916892992036348Escherichia coli 55989, complete genometransposase ORF A, IS3 family6e-1166.2
NC_013353:3669500:371511937151193715466348Escherichia coli O103:H2 str. 12009, complete genomeIS602 transposase OrfA6e-1166.2
AP010958:3669500:371511937151193715466348Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted IS602 transposase OrfA6e-1166.2
NC_010488:48868:673566735667667312Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequencehypothetical protein6e-1166.2
NC_011415:1472500:149204614920461492393348Escherichia coli SE11 chromosome, complete genomehypothetical protein6e-1166.2
NC_013364:3701895:375685437568543757201348Escherichia coli O111:H- str. 11128, complete genomeputative IS602 transposase OrfA6e-1166.2
NC_020063:4127161:413226041322604132571312Enterobacteriaceae bacterium strain FGI 57, complete genometransposase6e-1166.2
NC_015963:117178:146644146644146946303Enterobacter asburiae LF7a plasmid pENTAS01, complete sequencetransposase IS3/IS911 family protein5e-1166.2
NC_012214:2805297:281743728174372817739303Erwinia pyrifoliae Ep1/96, complete genomeTransposase, probable fragment5e-1166.2
NC_012214:1117325:112660611266061126908303Erwinia pyrifoliae Ep1/96, complete genometransposase5e-1166.2
NC_012214:1212616:122310512231051223407303Erwinia pyrifoliae Ep1/96, complete genometransposase, orf A5e-1166.2
NC_012214:1355500:136826213682621368564303Erwinia pyrifoliae Ep1/96, complete genomeTransposase, probable orf A5e-1166.2
NC_012582:2013515:202291020229102023254345Vibrio cholerae O395 chromosome chromosome I, complete sequenceISVch4 transposase, OrfA1e-1065.1
NC_012580:353273:370503370503370847345Vibrio cholerae M66-2 chromosome II, complete sequenceISVch4 transposase, OrfB1e-1065.1
NC_012578:1838470:188552118855211885865345Vibrio cholerae M66-2 chromosome I, complete sequenceISVch4 transposase, OrfA1e-1065.1
NC_009457:1444449:149149114914911491835345Vibrio cholerae O395 chromosome 2, complete sequencetransposase OrfAB subunit A1e-1065.1
NC_009456:787322:799482799482799826345Vibrio cholerae O395 chromosome 1, complete sequencetransposase OrfAB subunit A1e-1065.1
NC_009456:787322:794155794155794499345Vibrio cholerae O395 chromosome 1, complete sequencetransposase OrfAB subunit A1e-1065.1
NC_002506:324552:358053358053358397345Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completetransposase OrfAB, subunit A1e-1065.1
NC_002505:1931750:193838819383881938732345Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetransposase OrfAB, subunit A1e-1065.1
NC_008253:4735418:475703447570344757369336Escherichia coli 536, complete genomeprobable transposase protein1e-1065.1
NC_002505:238569:262326262326262670345Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetransposase OrfAB, subunit A1e-1065.1
NC_002506:370629:435419435419435763345Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completetransposase OrfAB, subunit A1e-1065.1
NC_012583:440420:464116464116464460345Vibrio cholerae O395 chromosome chromosome II, complete sequenceISVch4 transposase, OrfA1e-1065.1
NC_012667:931390:931390931390931734345Vibrio cholerae MJ-1236 chromosome 2, complete genometransposase OrfAB subunit A1e-1065.1
NC_016446:49618:831208312083428309Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completetransposase OrfAB, subunit A1e-1065.1
NC_016446:119914:135996135996136304309Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completetransposase OrfAB, subunit A1e-1065.1
NC_016445:2938887:295416129541612954469309Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetransposase OrfAB, subunit A1e-1065.1
NC_016445:1363831:140978914097891410097309Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetransposase OrfAB, subunit A1e-1065.1
NC_015633:2565753:257612025761202576464345Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase1e-1065.1
NC_016945:370471:435238435238435582345Vibrio cholerae IEC224 chromosome II, complete sequencetransposase OrfAB subunit A1e-1065.1
NC_016945:324519:357871357871358215345Vibrio cholerae IEC224 chromosome II, complete sequencetransposase OrfAB subunit A1e-1065.1
NC_016944:238580:262337262337262681345Vibrio cholerae IEC224 chromosome I, complete sequencetransposase OrfAB subunit A1e-1065.1
NC_016944:1978058:198469619846961985040345Vibrio cholerae IEC224 chromosome I, complete sequencetransposase OrfAB subunit A1e-1065.1
NC_012668:1688500:170877517087751709119345Vibrio cholerae MJ-1236 chromosome 1, complete sequencetransposase OrfAB subunit A1e-1065.1
NC_012667:931390:100332310033231003667345Vibrio cholerae MJ-1236 chromosome 2, complete genometransposase OrfAB subunit A1e-1065.1
NC_010694:1052722:107302010730201073358339Erwinia tasmaniensis, complete genomeTransposase insN for insertion sequence element IS9112e-1064.3
NC_014306:3102000:310975731097573110068312Erwinia billingiae Eb661, complete genomeTransposase OrfAB, subunit A3e-1063.9
NC_011750:1094000:109738510973851097732348Escherichia coli IAI39 chromosome, complete genometransposase ORF A, IS3 family3e-1063.9
NC_012947:44512:582065820658517312Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransposase IS3/IS911 family protein3e-1063.9
NC_013941:1613595:161801916180191618366348Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-1063.9
NC_013941:4470932:447228444722844472631348Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-1063.9
NC_010498:301000:314956314956315267312Escherichia coli SMS-3-5, complete genomeIS911 transposase orfA3e-1063.9
NC_012967:3769499:378592037859203786267348Escherichia coli B str. REL606 chromosome, complete genometransposase3e-1063.9
NC_016445:1027143:105534210553421055659318Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetransposase OrfAB, subunit A3e-1063.9
NC_008253:3941938:397827739782773978579303Escherichia coli 536, complete genomeputative transposase3e-1063.9
NC_008253:3122148:315522931552293155531303Escherichia coli 536, complete genomeprobable transposase protein3e-1063.9
NC_008253:2828573:284248828424882842790303Escherichia coli 536, complete genomeputative transposase3e-1063.9
NC_007606:1209132:121876512187651219067303Shigella dysenteriae Sd197, complete genomeIS911 ORF14e-1063.5
NC_010660:33109:415224152241824303Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS911, transposase orfA6e-1063.2
NC_010658:2529033:253361025336102533912303Shigella boydii CDC 3083-94, complete genomeIS911, transposase orfA6e-1063.2
NC_016822:1431200:147404114740411474343303Shigella sonnei 53G, complete genomeIS911 orf16e-1063.2
NC_002695:3852233:387522238752223875566345Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-1063.2
NC_013008:3911356:393434539343453934689345Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase5e-1063.2
NC_010498:1094000:111515511151551115466312Escherichia coli SMS-3-5, complete genomeIS911 transposase orfA7e-1062.8
NC_012947:3917619:392474739247473925019273Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransposase IS3/IS911 family protein7e-1062.8
NC_012967:4473368:448908944890894489361273Escherichia coli B str. REL606 chromosome, complete genomeIS911 protein7e-1062.8
AC_000091:4501430:451187745118774512143267Escherichia coli W3110 DNA, complete genomepartial regulator of insertion element IS911B7e-1062.8
NC_000913:4494773:450522045052204505486267Escherichia coli K12, complete genomeKpLE2 phage-like element; partial regulator of insertion element IS911B7e-1062.8
NC_010473:4596500:460702846070284607294267Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; partial regulator of insertion element IS911B7e-1062.8
NC_007608:97092:121915121915122253339Shigella boydii Sb227 plasmid pSB4_227, complete sequenceIS911 ORF17e-1062.8
NC_004741:2456297:245629724562972456599303Shigella flexneri 2a str. 2457T, complete genomeIS911 orfA6e-1062.8
NC_004741:4364235:438579143857914386093303Shigella flexneri 2a str. 2457T, complete genomeIS911 orfA6e-1062.8
NC_004337:2478461:247817824781782478480303Shigella flexneri 2a str. 301, complete genomeIS911 ORF16e-1062.8
NC_008258:1873805:187703318770331877335303Shigella flexneri 5 str. 8401, complete genomeIS911 ORF16e-1062.8
NC_017319:192482:217234217234217536303Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS911 ORF16e-1062.8
NC_014121:3627588:366667736666773666979303Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS911 transposase orfB1e-0962.4
NC_014121:4299500:432301043230104323312303Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS911 transposase orfB1e-0962.4
NC_014121:2330451:233852223385222338824303Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS911 transposase orfB1e-0962.4
NC_004337:4374500:439355943935594393897339Shigella flexneri 2a str. 301, complete genomeIS911 ORF18e-1062.4
NC_004851:191709:216790216790217128339Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIS911 ORF18e-1062.4
NC_008563:4739333:475578047557804756103324Escherichia coli APEC O1, complete genometransposase InsN for insertion sequence element IS911B8e-1062.4
NC_011742:4655373:467044246704424670765324Escherichia coli S88 chromosome, complete genometransposase ORF A, IS3 family8e-1062.4
NC_008739:41793:596425964259947306Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencetransposase IS3/IS911 family protein1e-0962
NC_008740:443274:462564462564462869306Marinobacter aquaeolei VT8, complete genometransposase IS3/IS911 family protein1e-0962
NC_014800:329861:352451352451352774324Pseudoalteromonas sp. SM9913 chromosome chromosome II, completetransposase IS3/IS911 family protein1e-0962
NC_013971:73037:874338743387867435Erwinia amylovora ATCC 49946 chromosome, complete genometransposase1e-0961.6
NC_008577:2511326:252437425243742524574201Shewanella sp. ANA-3 chromosome 1, complete sequencetransposase IS3/IS9112e-0961.2
NC_009997:5188221:521562552156255215936312Shewanella baltica OS195, complete genometransposase IS3/IS911 family protein4e-0960.1
NC_009999:38832:613386133861649312Shewanella baltica OS195 plasmid pS19502, complete sequencetransposase IS3/IS911 family protein4e-0960.1
NC_008345:3756977:376294237629423763253312Shewanella frigidimarina NCIMB 400, complete genometransposase IS3/IS911 family protein4e-0960.1
NC_011566:4709672:471941947194194719727309Shewanella piezotolerans WP3, complete genomeISSwp4, transposase OrfA4e-0960.1
NC_006905:2857699:286167128616712862009339Salmonella enterica subsp. enterica serovar Choleraesuis strTransposase insN for insertion sequence element IS5e-0959.7
NC_011740:2859933:286655528665552866893339Escherichia fergusonii ATCC 35469, complete genome5e-0959.7
NC_009997:2699644:270561127056112705922312Shewanella baltica OS195, complete genometransposase IS3/IS911 family protein5e-0959.7
NC_013364:2672837:269686426968642697232369Escherichia coli O111:H- str. 11128, complete genome6e-0959.3
NC_011415:4767892:478541247854124785744333Escherichia coli SE11 chromosome, complete genometransposase8e-0958.9
NC_010067:2488141:250559925055992505850252Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0857.8
NC_016830:3697173:371073637107363711038303Pseudomonas fluorescens F113 chromosome, complete genometransposase is3 is911 family protein3e-0857.4
NC_010067:4418000:443261444326144432937324Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-0857
NC_010995:404574:409605409605409904300Cellvibrio japonicus Ueda107, complete genomeIS3 family transposase, orfA5e-0856.6
NC_010995:1648897:166241216624121662711300Cellvibrio japonicus Ueda107, complete genometransposase5e-0856.6
NC_011750:4947500:495791149579114958087177Escherichia coli IAI39 chromosome, complete genometransposase ORF A (fragment), IS9116e-0856.2
NC_008095:2071500:209216120921612092466306Myxococcus xanthus DK 1622, complete genometransposase orfA, IS3 family1e-0755.5
NC_017249:8137586:814468281446828144981300Bradyrhizobium japonicum USDA 6, complete genometransposase8e-0752.8
NC_004463:2118000:213085221308522131151300Bradyrhizobium japonicum USDA 110, complete genomeputative transposase8e-0752.8
NC_013889:1159343:116411611641161164406291Thioalkalivibrio sp. K90mix chromosome, complete genometransposase IS3/IS911 family protein1e-0652.4
NC_013889:1623697:163662216366221636912291Thioalkalivibrio sp. K90mix chromosome, complete genometransposase IS3/IS911 family protein1e-0652.4
NC_014550:2314359:232476623247662325092327Arthrobacter arilaitensis Re117, complete genometransposase of ISAar26, IS3 family, IS3 group, orfA9e-0752.4
NC_015731:313676:336196336196336492297Nitrosomonas sp. Is79A3 chromosome, complete genometransposase IS3/IS911 family protein1e-0652
NC_008344:1899317:192372119237211924017297Nitrosomonas eutropha C91, complete genometransposase IS3/IS911 family protein1e-0652
NC_012660:5793200:580859758085975808905309Pseudomonas fluorescens SBW25 chromosome, complete genometransposase for insertion sequence element1e-0651.6
NC_014228:2270000:229886322988632299039177Xenorhabdus nematophila ATCC 19061, complete genometransposase (fragment)1e-0651.6
NC_014550:3377834:343167334316733431999327Arthrobacter arilaitensis Re117, complete genometransposase of ISAar40, IS3 family, IS3 group, orfA2e-0651.2
NC_020126:8512908:851875585187558519093339Myxococcus stipitatus DSM 14675, complete genomeIS3 family transposase OrfA2e-0651.2
NC_014815:4385759:441624844162484416541294Micromonospora sp. L5 chromosome, complete genometransposase is3/is911 family protein3e-0650.8
NC_014815:2055286:206433820643382064631294Micromonospora sp. L5 chromosome, complete genometransposase is3/is911 family protein3e-0650.8
NC_014815:3272791:329365432936543293947294Micromonospora sp. L5 chromosome, complete genometransposase is3/is911 family protein3e-0650.8
NC_015434:2375439:238118623811862381479294Verrucosispora maris AB-18-032 chromosome, complete genometransposase IS3/IS911 family protein2e-0650.8
NC_015434:2460053:247788724778872478180294Verrucosispora maris AB-18-032 chromosome, complete genometransposase IS3/IS911 family protein2e-0650.8
NC_015434:2657781:266536626653662665659294Verrucosispora maris AB-18-032 chromosome, complete genometransposase IS3/IS911 family protein2e-0650.8
NC_014391:6710500:673612067361206736413294Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS3/IS911 family protein2e-0650.8
NC_009524:263587:276694276694277005312Psychrobacter sp. PRwf-1 chromosome, complete genometransposase IS3/IS911 family protein8e-0649.3