Pre_GI Gene

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Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:44512 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4451245330819cytoplasmic membrane lipoprotein-28QuickGO ontologyBLASTP
4533446257924carboxylateamino acidamine transporterQuickGO ontologyBLASTP
46368475521185sugar efflux transporterQuickGO ontologyBLASTP
4793448080147hypothetical proteinBLASTP
4834249187846hypothetical proteinBLASTP
4927249469198hypothetical proteinBLASTP
4948149969489hypothetical proteinBLASTP
4996650331366hypothetical proteinBLASTP
50229513531125Integrase catalytic regionQuickGO ontologyBLASTP
5131051666357transposase IS3IS911 family proteinQuickGO ontologyBLASTP
52699561963498outer membrane autotransporter barrel domain proteinQuickGO ontologyBLASTP
5747557630156hypothetical proteinBLASTP
5767958053375hypothetical proteinBLASTP
5820658517312transposase IS3IS911 family proteinQuickGO ontologyBLASTP
58364595271164TrbCQuickGO ontologyBLASTP
5958160066486single-strand binding proteinQuickGO ontologyBLASTP
60714630952382glucan 13-alpha-glucosidaseQuickGO ontologyBLASTP
63110644111302major facilitator superfamily MFS_1QuickGO ontologyBLASTP
64673657431071LacI family transcriptional regulatorQuickGO ontologyBLASTP
6576865998231hypothetical proteinBLASTP
66141671841044hypothetical proteinBLASTP