Pre_GI Gene

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Host: NC_016944 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016944:1978058 Vibrio cholerae IEC224 chromosome I, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
197805819791941137N-acetylglucosamine-6-phosphate deacetylaseQuickGO ontologyBLASTP
197961719819622346neuraminidaseQuickGO ontologyBLASTP
19821091982315207transcriptional regulatorQuickGO ontologyBLASTP
19824291982905477DNA repair protein RadCQuickGO ontologyBLASTP
19829021983039138hypothetical proteinBLASTP
19831351983830696hypothetical proteinBLASTP
19838271984699873transposase OrfAB subunit BQuickGO ontologyBLASTP
19846961985040345transposase OrfAB subunit AQuickGO ontologyBLASTP
198504719860871041hypothetical proteinBLASTP
19862221986581360hypothetical proteinBLASTP
19866301987001372hypothetical proteinBLASTP
19870621987640579hypothetical proteinBLASTP
19876591987979321hypothetical proteinBLASTP
19879661988340375hypothetical proteinBLASTP
19887421989008267phage proteinQuickGO ontologyBLASTP
19889201989153234hypothetical protein
19891501989611462hypothetical proteinBLASTP
198961419907231110eha proteinQuickGO ontologyBLASTP
199069519924521758hypothetical proteinBLASTP
19924591993430972hypothetical proteinBLASTP
19934321993764333hypothetical proteinBLASTP
19937691994104336hypothetical proteinBLASTP
19940941994330237hypothetical proteinBLASTP
19944201994881462hypothetical proteinBLASTP
19952461995422177hypothetical proteinBLASTP
19954731995919447hypothetical proteinBLASTP
19960261997012987hypothetical proteinBLASTP
19970571997266210hypothetical proteinBLASTP
19974491997688240hypothetical proteinBLASTP
19983021998826525hypothetical proteinBLASTP