Pre_GI Gene

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Host: NC_002505 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002505:1931750 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
193175019328861137N-acetylglucosamine-6-phosphate deacetylaseQuickGO ontologyBLASTP
193323119356542424neuraminidaseQuickGO ontologyBLASTP
19358011936007207transcriptional regulatorQuickGO ontologyBLASTP
19361211936597477DNA repair protein RadC putativeQuickGO ontologyBLASTP
19365941936731138hypothetical proteinBLASTP
19368271937522696hypothetical proteinBLASTP
19375191938391873transposase OrfAB subunit BQuickGO ontologyBLASTP
19383881938732345transposase OrfAB subunit AQuickGO ontologyBLASTP
193873919397791041hypothetical proteinBLASTP
19399141940273360hypothetical proteinBLASTP
19403221940699378hypothetical proteinBLASTP
19407541941332579hypothetical proteinBLASTP
19413511941671321transcriptional regulator putativeQuickGO ontologyBLASTP
19416581942032375middle operon regulator-related proteinQuickGO ontologyBLASTP
19428421943303462hypothetical proteinBLASTP
194330619444571152eha proteinQuickGO ontologyBLASTP
194438719461441758hypothetical proteinBLASTP
19461511947122972hypothetical proteinBLASTP
19474611947823363hypothetical proteinBLASTP
19477861948022237hypothetical proteinBLASTP
19481121948573462hypothetical proteinBLASTP
19488001949114315hypothetical proteinBLASTP
19491651949611447hypothetical proteinBLASTP
19497181950704987hypothetical proteinBLASTP
19516711952516846hypothetical proteinBLASTP