Pre_GI Gene

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Host: NC_008260 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008260:228475 Alcanivorax borkumensis SK2, complete genome

Host Lineage: Alcanivorax borkumensis; Alcanivorax; Alcanivoracaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: This bacterium was isolated from a seawater sediment sample in the North Sea. The species is able to use Mihagol-S (C14,15-n-alkanes) as a principal carbon source. Using n-alkanes as a sole carbon source causes the strains to produce extracellular and membrane-bound surface-active glucose lipids. Phenotypic analysis showed a restricted nutritional profile, high halotolerance, the absence of fermentative metabolism, and a low G+C content. This, in combination with a 16S phylogenetic study, allowed the placing of this organism into a new genus.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2284752308292355PhosphoglucomutasephosphomannomutaseQuickGO ontologyBLASTP
230980231432453deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
2315102327091200phosphopantothenate-cysteine ligaseQuickGO ontologyBLASTP
232968233642675DNA repair protein RadC homologQuickGO ontologyBLASTP
233902234138237ribosomal protein L28QuickGO ontologyBLASTP
234161234328168ribosomal protein L33QuickGO ontologyBLASTP
234902235357456hypothetical proteinBLASTP
235444236340897hypothetical proteinBLASTP
2363302375501221type II secretion system protein probableQuickGO ontologyBLASTP
2375632387621200hypothetical proteinBLASTP
2388462400181173type II secretion system proteinQuickGO ontologyBLASTP
240138240944807hypothetical proteinBLASTP
240937241797861hypothetical proteinBLASTP
241819242502684hypothetical proteinBLASTP
242499242783285hypothetical proteinBLASTP
2428762445461671hypothetical proteinBLASTP
244612244830219transposase putativeQuickGO ontologyBLASTP
246133246270138hypothetical protein
247037247423387glyoxalasebleomycin resistance family protein putativeQuickGO ontologyBLASTP