Pre_GI Gene

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Host: NC_008563 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008563:4739333 Escherichia coli APEC O1, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
47393334740058726hypothetical proteinBLASTP
47400424740800759ethanolamine utilization protein EutJQuickGO ontologyBLASTP
47408554741541687putative propanediol utilization proteinQuickGO ontologyBLASTP
474168147427991119putative iron-containing alcohol dehydrogenaseQuickGO ontologyBLASTP
47432914743695405hypothetical proteinBLASTP
47439294744204276hypothetical proteinBLASTP
47448424745252411putative hemolysin activator proteinQuickGO ontologyBLASTP
47453394745722384hypothetical proteinBLASTP
474596147474151455hypothetical proteinBLASTP
474754747493311785putative KAP family P-loop domain containing proteinQuickGO ontologyBLASTP
47493314750083753hypothetical proteinBLASTP
475006547513841320hypothetical proteinBLASTP
47513814752106726putative TatD-related deoxyribonucleaseQuickGO ontologyBLASTP
47526594753234576hypothetical proteinBLASTP
475324247545701329hypothetical proteinBLASTP
47549114755723813transposase insF for insertion sequence IS3ABCDEfAQuickGO ontologyBLASTP
47557804756103324transposase InsN for insertion sequence element IS911BQuickGO ontologyBLASTP
47561374756514378hypothetical proteinBLASTP
47571374757496360IS1 InsB proteinQuickGO ontologyBLASTP
47575234757795273IS1 InsA proteinQuickGO ontologyBLASTP
475804847595171470putative antiporterQuickGO ontologyBLASTP
475962247619912370hypothetical proteinBLASTP
476206647635651500putative amino acid antiporterQuickGO ontologyBLASTP