Pre_GI Gene

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Host: NC_016945 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016945:324519 Vibrio cholerae IEC224 chromosome II, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
324519325055537hypothetical proteinBLASTP
325192325707516outer membrane lipoprotein BlcQuickGO ontologyBLASTP
325857326354498hypothetical proteinBLASTP
326351326623273hypothetical proteinBLASTP
326849327013165hypothetical proteinBLASTP
327016327141126hypothetical proteinBLASTP
327391327837447hypothetical proteinBLASTP
327985328254270plasmid stabilization system proteinQuickGO ontologyBLASTP
328247328525279DNA-damage-inducible protein JQuickGO ontologyBLASTP
329826330224399glyoxalase family proteinQuickGO ontologyBLASTP
330419330670252hypothetical proteinBLASTP
330884331126243hypothetical proteinBLASTP
332478332945468hypothetical proteinBLASTP
333921334187267hypothetical proteinBLASTP
334174334419246hypothetical proteinBLASTP
334563335309747hypothetical proteinBLASTP
335518335619102hypothetical proteinBLASTP
335601335783183hypothetical proteinBLASTP
3359993370031005microcin immunity protein MccFQuickGO ontologyBLASTP
337156337515360hypothetical proteinBLASTP
337788338021234hypothetical proteinBLASTP
338289338795507hypothetical proteinBLASTP
338940339338399glyoxalase family proteinQuickGO ontologyBLASTP
339841340092252hypothetical proteinBLASTP
340361340786426hypothetical proteinBLASTP
340992341615624hypothetical proteinBLASTP
341828342307480H-REV 107-likeproteinQuickGO ontologyBLASTP
342495342908414glyoxalase family proteinQuickGO ontologyBLASTP
343059343337279plasmid stabilization system proteinQuickGO ontologyBLASTP
343334343618285CopG family transcriptional regulatorQuickGO ontologyBLASTP
343813344328516outer membrane lipoprotein BlcQuickGO ontologyBLASTP
344405344989585hypothetical proteinBLASTP
345298345399102hypothetical proteinBLASTP
345381345563183hypothetical proteinBLASTP
345763346236474hypothetical proteinBLASTP
34625134634393hypothetical proteinBLASTP
346385347011627hypothetical proteinBLASTP
347167347832666hypothetical proteinBLASTP
348012348173162hypothetical proteinBLASTP
348417348551135hypothetical proteinBLASTP
348530348709180hypothetical proteinBLASTP
348893349318426hypothetical proteinBLASTP
349446349745300hypothetical proteinBLASTP
349742349984243hypothetical proteinBLASTP
350213350791579hypothetical proteinBLASTP
35081335090593hypothetical proteinBLASTP
350965351126162hypothetical proteinBLASTP
351329352012684hypothetical proteinBLASTP
352226352492267hypothetical proteinBLASTP
352647353246600hypothetical proteinBLASTP
353527354462936hypothetical proteinBLASTP
354428354568141hypothetical proteinBLASTP
3546803557021023hypothetical proteinBLASTP
355647356249603hypothetical proteinBLASTP
356310357005696hypothetical proteinBLASTP
357002357874873transposase OrfAB subunit BQuickGO ontologyBLASTP
357871358215345transposase OrfAB subunit AQuickGO ontologyBLASTP