Pre_GI: BLASTP Hits

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Query: NC_016945:324519:328247 Vibrio cholerae IEC224 chromosome II, complete sequence

Start: 328247, End: 328525, Length: 279

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016446:49618:533455334553623279Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeDNA-damage-inducible protein J3e-48190
NC_002506:324552:328280328280328558279Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeDNA-damage-inducible protein J3e-48190
NC_011830:3786173:379924937992493799527279Desulfitobacterium hafniense DCB-2, complete genomeaddiction module antitoxin, RelB/DinJ family5e-0856.6
NC_014722:846084:864004864004864276273Burkholderia rhizoxinica HKI 454, complete genomeDNA-damage-inducible protein J3e-0753.9
NC_011761:1357799:137525413752541375523270Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA-damage-inducible protein J8e-0752.4
NC_002967:552000:558535558535558807273Treponema denticola ATCC 35405, complete genomeDNA-damage-inducible protein J, putative2e-0651.2
NC_012846:986877:989045989045989317273Bartonella grahamii as4aup, complete genomeDNA-damage-inducible protein J3e-0650.8
NC_012846:1778443:178061117806111780883273Bartonella grahamii as4aup, complete genomeDNA-damage-inducible protein J3e-0650.8
NC_012846:1708840:172488117248811725153273Bartonella grahamii as4aup, complete genomeDNA-damage-inducible protein J3e-0650.8
NC_012846:1952178:195434619543461954618273Bartonella grahamii as4aup, complete genomeDNA-damage-inducible protein J3e-0650.8
NC_013316:2033906:205591020559102056278369Clostridium difficile R20291, complete genomeaddiction module antitoxin, relb/dinj family3e-0650.4
NC_010161:432000:433469433469433726258Bartonella tribocorum CIP 105476, complete genomeDNA-damage-inducible protein4e-0650.4