Pre_GI Gene

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Host: NC_009656 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009656:2512733 Pseudomonas aeruginosa PA7 chromosome, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25125112512780270hypothetical protein
251273325146551923threonyl-tRNA synthetaseQuickGO ontologyBLASTP
25146732515206534translation initiation factor IF-3QuickGO ontologyBLASTP
2515268251546219550S ribosomal protein L35QuickGO ontologyBLASTP
2515486251584235750S ribosomal protein L20QuickGO ontologyBLASTP
251594025169561017phenylalanyl-tRNA synthetase subunit alphaQuickGO ontologyBLASTP
251699125193692379phenylalanyl-tRNA synthetase subunit betaQuickGO ontologyBLASTP
25193732519675303integration host factor subunit alphaQuickGO ontologyBLASTP
25196562520012357hypothetical proteinBLASTP
25203422520605264hypothetical proteinBLASTP
25216042522122519hypothetical proteinBLASTP
252255425248782325putative prophage encoded two-component system histidine kinaseQuickGO ontologyBLASTP
25250392525488450patch repair proteinQuickGO ontologyBLASTP
252554125310335493hypothetical proteinBLASTP
253102625325701545hypothetical proteinBLASTP
253256725347142148hypothetical proteinBLASTP
253473525362911557modification methylase DdeIQuickGO ontologyBLASTP
25366572536869213hypothetical protein
25375882537746159hypothetical protein
25378192538088270hypothetical protein
25383882539215828hypothetical proteinBLASTP
25392422539550309hypothetical proteinBLASTP
253965525410041350hypothetical proteinBLASTP
254100125472976297hypothetical proteinBLASTP
25473122547950639putative radical activating enzymeQuickGO ontologyBLASTP