Pre_GI Gene

Some Help

Host: NC_002506 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002506:370629 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
370629371468840hypothetical proteinBLASTP
371673372503831hypothetical proteinBLASTP
372560373042483hypothetical proteinBLASTP
373206373373168hypothetical proteinBLASTP
373489374364876hypothetical proteinBLASTP
374494374949456acetyltransferase putativeQuickGO ontologyBLASTP
375133375546414hypothetical proteinBLASTP
375613376131519acetyltransferase putativeQuickGO ontologyBLASTP
376324376581258hypothetical proteinBLASTP
376904377038135hypothetical proteinBLASTP
377315377935621hypothetical proteinBLASTP
378083378598516lipoprotein BlcQuickGO ontologyBLASTP
378901379083183hypothetical proteinBLASTP
379262379609348hypothetical proteinBLASTP
379771380229459hypothetical proteinBLASTP
380380380742363hypothetical proteinBLASTP
380926381066141hypothetical proteinBLASTP
381045381224180hypothetical proteinBLASTP
381420382073654hypothetical proteinBLASTP
382198382623426hypothetical proteinBLASTP
382786383145360hypothetical proteinBLASTP
383328383651324hypothetical proteinBLASTP
383932384468537acetyltransferase putativeQuickGO ontologyBLASTP
385229385411183hypothetical proteinBLASTP
385530386315786hypothetical proteinBLASTP
386384386779396hypothetical proteinBLASTP
387025387450426hypothetical proteinBLASTP
387652387945294hypothetical proteinBLASTP
387942388301360hypothetical proteinBLASTP
388283388729447hypothetical proteinBLASTP
388985389410426hypothetical proteinBLASTP
389588389821234hypothetical proteinBLASTP
389797389955159hypothetical proteinBLASTP
390185390610426hypothetical proteinBLASTP
391044391148105hypothetical proteinBLASTP
39116639126499hypothetical proteinBLASTP
391358391753396hypothetical proteinBLASTP
391927392361435hypothetical proteinBLASTP
392515393372858hypothetical proteinBLASTP
393549393683135hypothetical proteinBLASTP
393668393847180hypothetical proteinBLASTP
394041394556516acetyltransferase putativeQuickGO ontologyBLASTP
394853394978126hypothetical proteinBLASTP
394941395057117hypothetical proteinBLASTP
3952453962491005microcin immunity protein MccFQuickGO ontologyBLASTP
396402396848447hypothetical proteinBLASTP
396968397897930hypothetical proteinBLASTP
398032398508477acetyltransferase putativeQuickGO ontologyBLASTP
398645399160516lipoprotein BlcQuickGO ontologyBLASTP
399296399586291relE proteinQuickGO ontologyBLASTP
399576399824249hypothetical proteinBLASTP
400089400280192haemagglutininQuickGO ontologyBLASTP
400356401048693haemagglutinin associated proteinQuickGO ontologyBLASTP
401320401745426hypothetical proteinBLASTP
401919402348430BLASTP
402499403029531hypothetical proteinBLASTP
403167403667501hypothetical proteinBLASTP
403793403903111hypothetical proteinBLASTP
404320404784465hypothetical proteinBLASTP
405167406152986BLASTP
406385406981597hypothetical proteinBLASTP
407272407406135hypothetical proteinBLASTP
407778408392615hypothetical proteinBLASTP
408539409396858hypothetical proteinBLASTP
409543410103561hypothetical proteinBLASTP
410246410593348hypothetical proteinBLASTP
410724410849126hypothetical proteinBLASTP
410985411089105hypothetical proteinBLASTP
412362412760399biphenyl-23-diol 12-dioxygenase III-related proteinQuickGO ontologyBLASTP
412827413204378hypothetical proteinBLASTP
413348413752405hypothetical proteinBLASTP
414129414287159hypothetical proteinBLASTP
414638414796159hypothetical proteinBLASTP
414949415281333hypothetical proteinBLASTP
415268415582315hypothetical proteinBLASTP
415719416153435acetyltransferase putativeQuickGO ontologyBLASTP
416321416476156hypothetical proteinBLASTP
416601417581981IS5 transposaseQuickGO ontologyBLASTP
417604417921318acetyltransferase putativeQuickGO ontologyBLASTP
418092418784693acetyltransferase putativeQuickGO ontologyBLASTP
418784419185402doc proteinQuickGO ontologyBLASTP
419373419786414hypothetical proteinBLASTP
419979420251273hypothetical proteinBLASTP
420238420528291hypothetical proteinBLASTP
420656421111456acetyltransferase putativeQuickGO ontologyBLASTP
421433421585153hypothetical proteinBLASTP
421787422284498hypothetical proteinBLASTP
422281422553273hypothetical proteinBLASTP
422784423452669hypothetical proteinBLASTP
423604423891288hypothetical proteinBLASTP
424032424403372mazG-related proteinQuickGO ontologyBLASTP
424470424895426hypothetical proteinBLASTP
424892425425534hypothetical proteinBLASTP
425627425884258hypothetical proteinBLASTP
425872426174303hypothetical proteinBLASTP
4263124273251014lipase GDXG familyQuickGO ontologyBLASTP
427398427871474hypothetical proteinBLASTP
428007428260254BLASTP
428335428772438IS1004 transposaseQuickGO ontologyBLASTP
428878429054177hypothetical protein interruptionQuickGO ontologyBLASTP
429229430101873hypothetical proteinBLASTP
430170430850681glutathione S-transferase putativeQuickGO ontologyBLASTP
431036431311276hypothetical proteinBLASTP
431305431826522hypothetical proteinBLASTP
431958432122165hypothetical proteinBLASTP
432119432220102hypothetical proteinBLASTP
432501432896396hypothetical proteinBLASTP
432953433090138hypothetical proteinBLASTP
433035433313279hypothetical proteinBLASTP
433310433678369relB proteinQuickGO ontologyBLASTP
433710434303594acetyltransferase putativeQuickGO ontologyBLASTP
434487434900414hypothetical proteinBLASTP
435419435763345transposase OrfAB subunit AQuickGO ontologyBLASTP
435760436632873transposase OrfAB subunit BQuickGO ontologyBLASTP
436670436789120hypothetical proteinBLASTP
4369224398282907hypothetical proteinBLASTP