Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:1613595 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
161359516170713477host specificity proteinQuickGO ontologyBLASTP
161715316181991047IS911 transposase orfBQuickGO ontologyBLASTP
16180191618366348hypothetical proteinBLASTP
16184961619023528Opacity protein-like surface antigenQuickGO ontologyBLASTP
161908216204011320hypothetical proteinBLASTP
16208931621435543hypothetical proteinBLASTP
16215841621991408NleA8-2 proteinQuickGO ontologyBLASTP
16226471623387741integraseQuickGO ontologyBLASTP
16238131624724912Non-LEE-encoded type III effector HQuickGO ontologyBLASTP
16247901625359570hypothetical proteinBLASTP
16256931626040348transposase within CP-933OQuickGO ontologyBLASTP
16276431627759117hypothetical proteinBLASTP
16278191628325507YciE proteinQuickGO ontologyBLASTP
16283711628892522YciF proteinQuickGO ontologyBLASTP
16289571629160204hypothetical proteinBLASTP
16295171630323807Tryptophan synthase alpha chainQuickGO ontologyBLASTP
163032316315161194Tryptophan synthase beta chainQuickGO ontologyBLASTP
163152816328891362bifunctional indole-3-glycerol phosphate synthasephosphoribosylanthranilate isomeraseQuickGO ontologyBLASTP
163289016344851596Anthranilate synthase component IIQuickGO ontologyBLASTP
163448516360471563anthranilate synthase component IQuickGO ontologyBLASTP
1636139163618345trp operon leader peptideQuickGO ontology
16363211637202882phosphoesteraseQuickGO ontologyBLASTP
16371631637819657hypothetical proteinBLASTP