Pre_GI Gene

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Host: NC_018080 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_018080:4280401 Pseudomonas aeruginosa DK2 chromosome, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
42804014281204804rRNA methyltransferaseQuickGO ontologyBLASTP
42812224281605384hypothetical proteinBLASTP
42817114281920210cold-shock proteinQuickGO ontologyBLASTP
428224042838561617two-component sensorQuickGO ontologyBLASTP
42839404284650711two-component response regulatorQuickGO ontologyBLASTP
428538342882742892ribonucleotide-diphosphate reductase subunit alphaQuickGO ontologyBLASTP
428853842897851248ribonucleotide-diphosphate reductase subunit betaQuickGO ontologyBLASTP
42923484293175828hypothetical proteinBLASTP
42932024293510309hypothetical proteinBLASTP
42935754294078504hypothetical proteinBLASTP
42942844294517234hypothetical protein
42949334295094162hypothetical proteinBLASTP
42953694295641273hypothetical protein
42960824296342261hypothetical proteinBLASTP
42967114297079369hypothetical proteinBLASTP
42971074297886780hypothetical proteinBLASTP
429819843001141917exotoxin AQuickGO ontologyBLASTP
430037443018641491amino acid permeaseQuickGO ontologyBLASTP
430196643031471182iron-containing alcohol dehydrogenaseQuickGO ontologyBLASTP
43031524304054903transcriptional regulatorQuickGO ontologyBLASTP
430454843058821335major facilitator superfamily transporterQuickGO ontologyBLASTP
43059504306603654hypothetical proteinBLASTP
43066854307401717transcriptional regulatorQuickGO ontologyBLASTP
43078464307953108hypothetical protein
43080894308679591hexapeptide repeat-containing transferaseQuickGO ontologyBLASTP