Pre_GI Gene

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Host: NC_010488 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010488:48868 Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4886849050183hypothetical proteinBLASTP
4905049421372hypothetical proteinBLASTP
4951149936426putative antirestriction proteinQuickGO ontologyBLASTP
5001650186171hypothetical proteinBLASTP
5033851309972IS110 family transposaseQuickGO ontologyBLASTP
5136251865504IS1 transposase orfBQuickGO ontologyBLASTP
5187652088213IS1 transposase orfAQuickGO ontologyBLASTP
5251452657144hypothetical proteinBLASTP
5262353036414hypothetical proteinBLASTP
5366454635972plasmid partition protein SopBQuickGO ontologyBLASTP
54635558101176plasmid partition protein SopAQuickGO ontologyBLASTP
5610156604504IS1 transposase orfBQuickGO ontologyBLASTP
5661556827213IS1 transposase orfAQuickGO ontologyBLASTP
56954584561503hypothetical proteinBLASTP
5905659481426hypothetical proteinBLASTP
5963860102465hypothetical proteinBLASTP
6017860372195hypothetical proteinBLASTP
6060260793192hypothetical proteinBLASTP
6138662243858ironmanganese transport system membrane protein SitDQuickGO ontologyBLASTP
6224063097858ironmanganese transport system membrane protein SitCQuickGO ontologyBLASTP
6309463921828ironmanganese transport system membrane protein SitBQuickGO ontologyBLASTP
6392164835915ironmanganese transport system periplasmic binding protein SitAQuickGO ontologyBLASTP
6516265374213IS1 transposase orfAQuickGO ontologyBLASTP
6538565888504IS1 transposase orfBQuickGO ontologyBLASTP
6711267288177hypothetical protein
6735667667312hypothetical proteinBLASTP
6768067862183hypothetical protein
6778768533747integrase core subunitQuickGO ontologyBLASTP
6855468778225hypothetical protein
6891569085171hypothetical protein
6907870055978repFIB replication protein AQuickGO ontologyBLASTP
7034071080741site-specific recombinaseQuickGO ontologyBLASTP
7176372671909Mig-14 family proteinQuickGO ontologyBLASTP