Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:2857699 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
285629328577021410putative outer membrane efflux proteinQuickGO ontologyBLASTP
285769928598792181putative ABC transporter transmembrane regionQuickGO ontologyBLASTP
285986028610501191putative HlyD family secretion proteinQuickGO ontologyBLASTP
28612692861583315hypothetical proteinBLASTP
28616712862009339Transposase insN for insertion sequence element ISQuickGO ontologyBLASTP
28620362862875840hypothetical proteinBLASTP
28635012864460960reverse transcriptase-like proteinQuickGO ontologyBLASTP
28643632865349987hypothetical proteinBLASTP
28659672866506540Flagellar synthesis repressor of fliCQuickGO ontologyBLASTP
28697962870368573H inversion regulation of flagellar gene expression by site-specific inversion of DNAQuickGO ontologyBLASTP
28707722870954183hypothetical proteinBLASTP
287105928721741116putative glycosyl transferase related to UDP-glucuronosyltransferaseQuickGO ontologyBLASTP
287225528759113657putative ATP binding cassette ABC transporterQuickGO ontologyBLASTP
287602128772651245Similar to enterochelin esterase of E coli FesQuickGO ontologyBLASTP
28772972878232936IroEQuickGO ontologyBLASTP
287827428804542181TonB-dependent siderophore receptor proteinQuickGO ontologyBLASTP
28809792881290312putative inner membrane proteinQuickGO ontologyBLASTP
288148628825381053Homolog of pipB putative pentapeptide repeats 8 copiesQuickGO ontologyBLASTP
28826102882948339hypothetical proteinBLASTP
28830572883986930virulence gene homologous sequence to virK in ShigellaQuickGO ontologyBLASTP
28843782885175798putative transcription activatorQuickGO ontologyBLASTP
288589628869091014putative nickel transporterQuickGO ontologyBLASTP
288704228885081467tricarboxylic transport regulatory proteinQuickGO ontologyBLASTP
28884442889118675tricarboxylic transport regulatory proteinQuickGO ontologyBLASTP
28891572889276120hypothetical proteinBLASTP
28892732890250978tricarboxylic transportQuickGO ontologyBLASTP
28902622890696435tricarboxylic transportQuickGO ontologyBLASTP
289070728922211515tricarboxylic transportQuickGO ontologyBLASTP
28925152893501987hypothetical proteinBLASTP
289352728947951269paral putative sarcosine oxidase-like proteinQuickGO ontologyBLASTP
289481728962651449succinate-semialdehyde dehydrogenase I NADP-dependentQuickGO ontologyBLASTP
2896280289756312844-aminobutyrate aminotransferaseQuickGO ontologyBLASTP
289769328990931401APC family gamma-aminobutyrate transport protein RpoS dependentQuickGO ontologyBLASTP