Pre_GI Gene

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Host: NC_012967 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012967:3769499 Escherichia coli B str. REL606 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
376949937712081710hypothetical proteinBLASTP
377126137735792319alpha-xylosidase YicIQuickGO ontologyBLASTP
377358937749711383putative transporterQuickGO ontologyBLASTP
3775264377535491tRNA-SecQuickGO ontologyBLASTP
377565837768421185IntQuickGO ontologyBLASTP
377725337782961044ShiA-like proteinQuickGO ontologyBLASTP
37784393778669231hypothetical proteinBLASTP
377869437797881095putative transcriptional regulatorQuickGO ontologyBLASTP
377996937813271359hypothetical proteinBLASTP
378133637837232388hypothetical proteinBLASTP
37843713784856486Single-strand binding protein SSB Helix-destabilizing proteinQuickGO ontologyBLASTP
378491037860731164TrbC-like proteinQuickGO ontologyBLASTP
37859203786267348transposaseQuickGO ontologyBLASTP
37863843786722339hypothetical proteinBLASTP
37868073786962156hypothetical proteinBLASTP
37870903787392303hypothetical protein
37879593788213255hypothetical protein
378824137917383498hypothetical proteinBLASTP
37918953792308414hypothetical proteinBLASTP
37923733792555183hypothetical protein
37925983792744147hypothetical proteinBLASTP
37927713793127357putative IS proteinQuickGO ontologyBLASTP
379308437942081125IS30 transposaseQuickGO ontologyBLASTP
37941063794471366hypothetical proteinBLASTP
37944683794956489hypothetical proteinBLASTP
37949233795165243Aec78QuickGO ontologyBLASTP