Pre_GI Gene

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Host: NC_012583 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012583:440420 Vibrio cholerae O395 chromosome chromosome II, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
440420441148729hypothetical proteinBLASTP
441627441863237hypothetical proteinBLASTP
442249442962714hypothetical proteinBLASTP
445969446346378hypothetical proteinBLASTP
446361446762402hypothetical proteinBLASTP
4472494489071659hypothetical proteinBLASTP
449225449719495hypothetical proteinBLASTP
450016450513498GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
450510450782273hypothetical proteinBLASTP
451013451681669hypothetical proteinBLASTP
451833452120288hypothetical proteinBLASTP
452261452632372mazG-related proteinQuickGO ontologyBLASTP
452723453124402hypothetical proteinBLASTP
453121453654534GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
453856454113258Antitoxin of toxin-antitoxin stability systemQuickGO ontologyBLASTP
454101454403303Plasmid stabilization system proteinQuickGO ontologyBLASTP
4545414555541014lipase GDXG familyQuickGO ontologyBLASTP
455651456004354hypothetical proteinBLASTP
456158456568411hypothetical proteinBLASTP
457032457469438IS1004 transposaseQuickGO ontologyBLASTP
457926458798873hypothetical proteinBLASTP
458930459547618glutathione S-transferase putativeQuickGO ontologyBLASTP
459733460008276hypothetical proteinBLASTP
460002460523522hypothetical proteinBLASTP
460655460819165hypothetical proteinBLASTP
460816460917102hypothetical proteinBLASTP
461198461593396hypothetical proteinBLASTP
461732462010279plasmid stabilization system proteinQuickGO ontologyBLASTP
462007462375369relB proteinQuickGO ontologyBLASTP
462479463000522GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
463184463597414Glyoxalasebleomycin resistance proteinQuickGO ontologyBLASTP
464116464460345ISVch4 transposase OrfAQuickGO ontologyBLASTP
464457465329873ISVch4 transposase OrfBQuickGO ontologyBLASTP
465409465678270hypothetical proteinBLASTP
465692466636945hypothetical proteinBLASTP